Escherichia coli 19-5 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Escherichia coli 19-5 RM systems
Ref: Liu,Z. and Chen,P. unpublished
REBASE ref # 31984
| Sequence length: | GenBank #: | |
| Chromosome: | 4,710,580 bp | CP047010 |
| plasmid pCMY-2: | 101,644 bp | CP047012 |
| plasmid pfloR: | 161,471 bp | CP047011 |
| plasmid ptetA: | 93,419 bp | CP047013 |
REBASE acronym: Ecos195
Org_num: 47720
All begin GQF95_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 10130 | helix-turn-helix domain-containing protein | |||
| 10135 | M | M.KpnLZORFCP (100% identity) | M.Ecos195ORF10135P | |
| 10140 | S | S.EcoYY761ORF11570P (100% identity) | S.Ecos195ORF10135P | |
| 10145 | UPF0149 family protein | |||
| 10150 | R | EcoYY761ORF11570P (100% identity) | Ecos195ORF10135P | |
| 10155 | DUF45 domain-containing protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 995 | 67 aa hypothetical protein | |||
| 1000 | M | M.SflSTLE1ORF5465P (99% identity) | M.Ecos195ORF1000P | |
| 1005 | phage holin, lambda family | |||
| 4150 | DUF499 domain-containing protein | |||
| 4155 | M | M.Eco6193ORF321P (100% identity) | M.Ecos195ORF4155P | |
| 4160 | AAA family ATPase | |||
| 12710 | drug/metabolite exporter YedA | |||
| 12715 | V | V.EcoYY761DcmP (100% identity) | V.Ecos195DcmP | |
| 12720 | M | M.EcoYY761DcmP (100% identity) | CCWGG | M.Ecos195DcmP |
| 12725 | phosphohydrolase | |||
| 19265 | DNA-binding transcriptional regulator Fis | |||
| 19270 | M | M.Sso8ORF2545P (100% identity) | ATGCAT | M.Ecos195ORF19270P |
| 19275 | DUF2556 domain-containing protein | |||
| 19890 | ribulose-phosphate 3-epimerase | |||
| 19895 | M | M.SspPIBDamP (100% identity) | GATC | M.Ecos195DamP |
| 19900 | cell division protein DamX | |||
| plasmid pCMY-2 | ||||
| 23970 | 102 aa hypothetical protein | |||
| 23975 | M | M.StyR64ORFAP (100% identity) | M.Ecos195ORF23975P | |
| 23980 | 73 aa hypothetical protein | |||
| plasmid pfloR | ||||
| 23195 | IS6-like element IS26 family transposase | |||
| 23200 | R | Ssp3CORF24390P (100% identity) | CCWGG | Ecos195ORF23205P |
| ??? | M | M.SflSTLE4ORF22820P (100% identity) | CCWGG | M.Ecos195ORF23205P |
| 23210 | IS1 family transposase | |||
| 23615 | 73 aa hypothetical protein | |||
| 23620 | M | M.UbapRSB107ORFAP (100% identity) | SAY | M.Ecos195ORF23620P |
| 23625 | 102 aa hypothetical protein | |||
| plasmid ptetA | ||||
| 24755 | glutamine--tRNA ligase | |||
| 24760 | M | M.Eco2582ORF29320P (100% identity) | M.Ecos195ORF24760P | |
| 24765 | 216 aa hypothetical protein | |||