Escherichia coli J-8 |
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Putative Escherichia coli J-8 RM systems
Ref: Liu,Z. and Chen,P. unpublished
REBASE ref # 31984
| Sequence length: | GenBank #: | |
| Chromosome: | 4,834,034 bp | CP047002 |
| plasmid pCTX: | 112,016 bp | CP047004 |
REBASE acronym: EcoJ8
Org_num: 47733
All begin GQF94_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 5370 | DUF45 domain-containing protein | |||
| 5375 | R | Ecoa005ORF12540P (100% identity) | EcoJ8ORF5385P | |
| 5380 | S | S1.Ecoa005ORF12540P (100% identity) | S.EcoJ8ORF5385P | |
| 5385 | M | M.Ecoa005ORF12540P (100% identity) | M.EcoJ8ORF5385P | |
| 5390 | 349 aa hypothetical protein | |||
| 11225 | ATP-binding protein | |||
| 11230 | R | SenSI167ORF3215P (100% identity) | EcoJ8ORF11245P | |
| 11235 | DUF4268 domain-containing protein | |||
| 11240 | S | S.SenSI167ORF3215P (100% identity) | S.EcoJ8ORF11245P | |
| 11245 | M | M.SenSI167ORF3215P (100% identity) | M.EcoJ8ORF11245P | |
| 11250 | IS3 family transposase | |||
| 17860 | 428 aa hypothetical protein | |||
| 17865 | S | S.EcosC41ORF5210P (98% identity) | GCAGNNNNNTGT | S.EcoJ8ORF17870P |
| 17870 | M | M.EcosC41ORF5210P (100% identity) | GCAGNNNNNTGT | M.EcoJ8ORF17870P |
| 17875 | 128 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 5670 | drug/metabolite exporter YedA | |||
| 5675 | V | V.SsoSE61DcmP (100% identity) | V.EcoJ8DcmP | |
| 5680 | M | M.SdyFF10DcmP (100% identity) | CCWGG | M.EcoJ8DcmP |
| 5685 | phosphohydrolase | |||
| 12310 | DNA-binding transcriptional regulator Fis | |||
| 12315 | M | M.SspS13ORF21055P (100% identity) | ATGCAT | M.EcoJ8ORF12315P |
| 12320 | DUF2556 domain-containing protein | |||
| 12865 | ribulose-phosphate 3-epimerase | |||
| 12870 | M | M.UbaC1152DamP (100% identity) | GATC | M.EcoJ8DamP |
| 12875 | cell division protein DamX | |||
| 17885 | AAA domain-containing protein | |||
| 17890 | R | EcosC41ORF5230P (100% identity) | EcoJ8ORF17890P | |
| 17895 | sialate O-acetylesterase | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 17875 | 128 aa hypothetical protein | |||
| 17880 | R | Ecows53McrCP (100% identity) | EcoJ8McrCP | |
| 17885 | R | SflN101McrBP (100% identity) | EcoJ8McrBP | |
| 17890 | HNH endonuclease | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| plasmid pCTX | ||||
| 24115 | 76 aa hypothetical protein | |||
| 24120 | M | M.Sso524ORF460P (100% identity) | M.EcoJ8ORF24120P | |
| 24125 | 269 aa hypothetical protein | |||