Escherichia coli 588889 |
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Putative Escherichia coli 588889 RM systems
Ref: Greig,D.R. et al. unpublished
REBASE ref # 31809
| Sequence length: | GenBank #: | |
| Chromosome: | 5,527,095 bp | CP073609 |
| plasmid p588889_1: | 92,960 bp | CP073610 |
REBASE acronym: Eco588889
Org_num: 47722
All begin D6D43_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3360 | endoribonuclease SymE | |||
| 3365 | S | S.EcosPA8ORF17615P (100% identity) | CACNNNNNNNCTGG | S.Eco588889ORF3370P |
| 3370 | M | M.EcosPA8ORF17615P (100% identity) | CACNNNNNNNCTGG | M.Eco588889ORF3370P |
| 3375 | R | Ecos1613ORF27060P (100% identity) | CACNNNNNNNCTGG | Eco588889ORF3370P |
| 3380 | DUF262 domain-containing protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1875 | 65 aa hypothetical protein | |||
| ??? | M | M.Ecos1613ORF25555P (100% identity) | M.Eco588889ORF1880P | |
| 1885 | Eae protein | |||
| 3105 | transposase | |||
| 3110 | R | Ecos1613ORF26795P (100% identity) | Eco588889ORF3110P | |
| 3115 | N-acetylneuraminic acid mutarotase | |||
| 3145 | DEAD/DEAH box helicase | |||
| 3150 | RM | EcosPA8ORF17390P (100% identity) | GAAABCC | Eco588889ORF3150P |
| 9410 | phosphohydrolase | |||
| 9415 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.Eco588889DcmP |
| 9420 | V | V.EcosPA8DcmP (100% identity) | V.Eco588889DcmP | |
| 9425 | drug/metabolite exporter YedA | |||
| 13960 | DUF1737 domain-containing protein | |||
| 13975 | M | M.EcosPA8ORF27255P (100% identity) | M.Eco588889ORF13975P | |
| 13980 | TrmB family transcriptional regulator | |||
| 17830 | NinE family protein | |||
| 17835 | M | M.Eph2851ORFAP (100% identity) | GATC | M.Eco588889ORF17835P |
| 17840 | recombination protein NinB | |||
| 24895 | DNA-binding transcriptional regulator Fis | |||
| 24900 | M | M.EcosPA8ORF11510P (100% identity) | ATGCAT | M.Eco588889ORF24900P |
| 24905 | DUF2556 family protein | |||
| 25415 | ribulose-phosphate 3-epimerase | |||
| 25420 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco588889DamP |
| 25425 | cell division protein DamX | |||
| plasmid p588889_1 | ||||
| 27600 | 101 aa hypothetical protein | |||
| 27605 | M | M.EcosPA8ORF27775P (100% identity) | M.Eco588889ORF27605P | |
| 27610 | 73 aa hypothetical protein | |||