Escherichia coli 401794 |
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Putative Escherichia coli 401794 RM systems
Ref: Greig,D.R. et al. unpublished
REBASE ref # 31809
| Sequence length: | GenBank #: | |
| Chromosome: | 5,527,760 bp | CP073617 |
| plasmid p401794: | 92,958 bp | CP073618 |
REBASE acronym: Eco401794
Org_num: 46511
All begin CPQ30_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3360 | endoribonuclease SymE | |||
| 3365 | S | S.EcosPA8ORF17615P (100% identity) | CACNNNNNNNCTGG | S.Eco401794ORF3370P |
| 3370 | M | M.EcosPA8ORF17615P (100% identity) | CACNNNNNNNCTGG | M.Eco401794ORF3370P |
| 3375 | R | Ecos1613ORF27060P (100% identity) | CACNNNNNNNCTGG | Eco401794ORF3370P |
| 3380 | DUF262 domain-containing protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1875 | 65 aa hypothetical protein | |||
| ??? | M | M.Ecos1613ORF25555P (100% identity) | M.Eco401794ORF1880P | |
| 1885 | Eae protein | |||
| 3105 | transposase | |||
| 3110 | R | Ecos1613ORF26795P (100% identity) | Eco401794ORF3110P | |
| 3115 | N-acetylneuraminic acid mutarotase | |||
| 3145 | DEAD/DEAH box helicase | |||
| 3150 | RM | EcosPA8ORF17390P (100% identity) | GAAABCC | Eco401794ORF3150P |
| 12415 | TrmB family transcriptional regulator | |||
| 12420 | M | M.EcosPA8ORF27255P (100% identity) | M.Eco401794ORF12420P | |
| 12435 | DUF1737 domain-containing protein | |||
| 16980 | drug/metabolite exporter YedA | |||
| 16985 | V | V.EcosPA8DcmP (100% identity) | V.Eco401794DcmP | |
| 16990 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.Eco401794DcmP |
| 16995 | phosphohydrolase | |||
| 17815 | NinE family protein | |||
| 17820 | M | M.Eph2851ORFAP (100% identity) | GATC | M.Eco401794ORF17820P |
| 17825 | recombination protein NinB | |||
| 24895 | DNA-binding transcriptional regulator Fis | |||
| 24900 | M | M.EcosPA8ORF11510P (100% identity) | ATGCAT | M.Eco401794ORF24900P |
| 24905 | DUF2556 family protein | |||
| 25415 | ribulose-phosphate 3-epimerase | |||
| 25420 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco401794DamP |
| 25425 | cell division protein DamX | |||
| plasmid p401794 | ||||
| 27570 | 101 aa hypothetical protein | |||
| 27575 | M | M.EcosPA8ORF27775P (100% identity) | M.Eco401794ORF27575P | |
| 27580 | 73 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3345 | DUF1127 domain-containing protein | |||
| 3350 | R | Ecos1613GmrSP (100% identity) | Eco401794GmrSP | |
| 3355 | R | EcosPA8GmrSDP (55% identity) | Eco401794GmrDP | |
| 3360 | endoribonuclease SymE | |||