Escherichia coli CT30 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Escherichia coli CT30 RM systems
Ref: Zhuge,X. unpublished
REBASE ref # 29337
| Sequence length: | GenBank #: | |
| Chromosome: | 4,959,799 bp | CP032078 |
| plasmid p.CT30-P1: | 175,023 bp | CP032079 |
REBASE acronym: EcoCT30
Org_num: 46541
All begin D2195_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 21780 | restriction endonuclease | |||
| ??? | M | M.EcoCS18FORF18015P (100% identity) | GATANNNNNNTAG | M.EcoCT30ORF21785P |
| 21790 | S | S.Ecos641ORF3050P (100% identity) | GATANNNNNNTAG | S.EcoCT30ORF21785P |
| 21795 | R | Ecos641ORF3050P (100% identity) | GATANNNNNNTAG | EcoCT30ORF21785P |
| 21800 | endoribonuclease SymE | |||
| 22235 | 65 aa hypothetical protein | |||
| 22240 | R | EcosS1ORF25140P (100% identity) | TGANNNNNNCTTC | EcoCT30ORF22245P |
| 22245 | M | M.SspZ54ORF5015P (100% identity) | TGANNNNNNCTTC | M.EcoCT30ORF22245P |
| 22250 | S | S.SspZ54ORF5015P (100% identity) | TGANNNNNNCTTC | S.EcoCT30ORF22245P |
| 22255 | 540 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2340 | cell division protein DamX | |||
| 2345 | M | M.SspPIBDamP (100% identity) | GATC | M.EcoCT30DamP |
| 2350 | ribulose-phosphate 3-epimerase | |||
| 2970 | DUF2556 domain-containing protein | |||
| 2975 | M | M.EcosS1ORF18905P (100% identity) | ATGCAT | M.EcoCT30ORF2975P |
| 2980 | Fis family transcriptional regulator | |||
| 11830 | recombination protein NinB | |||
| 11835 | M | M.SflWW1ORF7070P (100% identity) | GATC | M.EcoCT30ORF11835P |
| 11840 | NinE family protein | |||
| 18135 | EamA family transporter | |||
| 18140 | V | V.EcosEC7DcmP (100% identity) | V.EcoCT30DcmP | |
| 18145 | M | M.SdySWHE2DcmP (100% identity) | CCWGG | M.EcoCT30DcmP |
| 18150 | phosphohydrolase | |||
| 21480 | phage holin, lambda family | |||
| 21485 | M | M.Sso63633ORF22290P (100% identity) | M.EcoCT30ORF21485P | |
| 21490 | 67 aa hypothetical protein | |||
| 22000 | HNH endonuclease | |||
| 22005 | R | SflFF17ORF19275P (100% identity) | EcoCT30ORF22005P | |
| 22010 | 59 aa hypothetical protein | |||
| plasmid p.CT30-P1 | ||||
| 25905 | thermonuclease family protein | |||
| 25910 | M | M.YpsF1ORFCP (100% identity) | M.EcoCT30ORF25910P | |
| 25915 | DUF1173 family protein | |||
| 26480 | 284 aa hypothetical protein | |||
| 26485 | M | M.YpsF1ORFDP (100% identity) | M.EcoCT30ORF26485P | |
| 26490 | DNA-binding protein | |||