Escherichia coli CT29 |
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Putative Escherichia coli CT29 RM systems
Ref: Zhuge,X. unpublished
REBASE ref # 29337
| Sequence length: | GenBank #: | |
| Chromosome: | 4,631,653 bp | CP032073 |
| plasmid p.CT29-P1: | 108,175 bp | CP032074 |
REBASE acronym: EcoCT29
Org_num: 46540
All begin D2194_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 18945 | glycosyltransferase | |||
| 18950 | M | M.EcoZ137ORF17375P (100% identity) | M.EcoCT29ORF18950P | |
| 18955 | S | S.EcoZ137ORF17375P (100% identity) | S.EcoCT29ORF18950P | |
| 18960 | DUF262 domain-containing protein | |||
| 18965 | DUF262 domain-containing protein | |||
| 18970 | R | EcoZ137ORF17375P (100% identity) | EcoCT29ORF18950P | |
| 18975 | M48 family peptidase | |||
| plasmid p.CT29-P1 | ||||
| 24505 | 158 aa hypothetical protein | |||
| 24510 | R | EcoZ151ORF20915P (98% identity) | EcoCT29ORF24520P | |
| 24515 | S | S.Eco83915ORF246P (90% identity) | S.EcoCT29ORF24520P | |
| 24520 | M | M.EcoZ1002ORF26975P (98% identity) | M.EcoCT29ORF24520P | |
| 24525 | 71 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1975 | cell division protein DamX | |||
| 1980 | M | M.SspPIBDamP (100% identity) | GATC | M.EcoCT29DamP |
| 1985 | ribulose-phosphate 3-epimerase | |||
| 2655 | DUF2556 domain-containing protein | |||
| 2660 | M | M.Ssp28760ORF20045P (100% identity) | ATGCAT | M.EcoCT29ORF2660P |
| 2665 | Fis family transcriptional regulator | |||
| 4940 | RM | MmoRB02ORF4475P (93% identity) | EcoCT29ORF4940P | |
| 4945 | DEAD/DEAH box helicase | |||
| 9240 | phosphohydrolase | |||
| 9245 | M | M.SspS13DcmP (100% identity) | CCWGG | M.EcoCT29DcmP |
| 9250 | V | V.SsoSE61DcmP (100% identity) | V.EcoCT29DcmP | |
| 9255 | drug/metabolite exporter YedA | |||
| 13205 | TraR/DksA family transcriptional regulator | |||
| 13210 | M | M.SspS13ORF8710P (100% identity) | GATC | M.EcoCT29ORF13210P |
| 13215 | replication endonuclease | |||
| 17385 | 343 aa hypothetical protein | |||
| 17390 | M | M.EcoMSI001ORF17885P (100% identity) | M.EcoCT29ORF17390P | |
| 17395 | phage replication protein | |||
| 20760 | HNH endonuclease | |||
| 20765 | R | EcoZ137ORF19075P (100% identity) | EcoCT29ORF20765AP | |
| 20770 | glycosyltransferase | |||
| 20775 | IS1 family transposase | |||
| 20780 | R | EcoSCU175ORF22480P (25% identity) | EcoCT29ORF20765BP | |
| 20785 | 332 aa hypothetical protein | |||
| 22185 | phage holin, lambda family | |||
| 22190 | M | M.EcoXDLORF15370P (100% identity) | M.EcoCT29ORF22190P | |
| 22195 | 67 aa hypothetical protein | |||
| 22220 | LexA family transcriptional regulator | |||
| 22225 | M | M.EcoXJ55ORF18610P (100% identity) | GATC | M.EcoCT29ORF22225P |
| 22230 | PerC family transcriptional regulator | |||
| plasmid p.CT29-P1 | ||||
| 24465 | 318 aa hypothetical protein | |||
| 24470 | M | M.SphSSU5ORF88P (95% identity) | M.EcoCT29ORF24470P | |
| 24475 | 76 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 9015 | prepilin-type N-terminal cleavage/methylation | |||
| 9020 | R | EcoZ137ORF8170P (100% identity) | EcoCT29ORF9025P | |
| 9025 | M | M.SenUJ816AORFEP (33% identity) | M.EcoCT29ORF9025BP | |
| 9030 | IS5-like element ISKpn26 family transposase | |||
| 9035 | ABC transporter | |||
| 9040 | M | M.SenUJ816AORFEP (66% identity) | M.EcoCT29ORF9025AP | |
| 9045 | SpnT protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 20555 | GTPase | |||
| 20560 | R | EcoZ137MrrP (100% identity) | EcoCT29MrrP | |
| 20565 | glycosyltransferase | |||