Escherichia coli Ec387 |
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Putative Escherichia coli Ec387 RM systems
Ref: Usui,M. and Fukuda,A. unpublished
REBASE ref # 31827
| Sequence length: | GenBank #: | |
| Chromosome: | 4,773,053 bp | AP024582 |
| plasmid p1-Ec387: | 291,362 bp | AP024583 |
REBASE acronym: EcoEc387
Org_num: 46574
All begin R9P_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 33030 | 290 aa hypothetical protein | |||
| 33040 | M | M.EcosE1ORFHP (93% identity) | M.EcoEc387ORF33040P | |
| 33050 | S | S.Eco655RtORF17345P (100% identity) | S.EcoEc387ORF33040P | |
| 33060 | R | EcosE1ORFHP (96% identity) | EcoEc387ORF33040P | |
| 33070 | 61 aa hypothetical protein | |||
| 37070 | 388 aa hypothetical protein | |||
| ??? | M | M.Eco52231ORF37180P (100% identity) | M.EcoEc387ORF37080P | |
| 37090 | S | S.EcoYZ311ORF11340P (100% identity) | S.EcoEc387ORF37080P | |
| 37100 | R | EcoYZ311ORF11340P (100% identity) | EcoEc387ORF37080P | |
| 37110 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3530 | cell division protein DamX | |||
| 3540 | M | M.UbaC1152DamP (100% identity) | GATC | M.EcoEc387DamP |
| 3550 | ribulose-phosphate 3-epimerase | |||
| 4710 | acrEF/envCD operon transcriptional regulator | |||
| 4720 | M | M.SflWW1ORF2205P (100% identity) | ATGCAT | M.EcoEc387ORF4720P |
| 4730 | DNA-binding protein Fis | |||
| 17550 | 231 aa hypothetical protein | |||
| 17560 | M | M.SflWW1DcmP (100% identity) | CCWGG | M.EcoEc387DcmP |
| 17570 | V | V.SsoSE61DcmP (100% identity) | V.EcoEc387DcmP | |
| 17580 | multidrug transporter | |||
| plasmid p1-Ec387 | ||||
| 43830 | 106 aa hypothetical protein | |||
| 43840 | M | M.Ssp15303ORFDP (100% identity) | M.EcoEc387ORF43840P | |
| 43850 | 202 aa hypothetical protein | |||
| 44120 | DNA-binding protein | |||
| 44130 | M | M.Ssp15303ORFEP (84% identity) | M.EcoEc387ORF44130P | |
| 44140 | 85 aa hypothetical protein | |||
| 45730 | 55 aa hypothetical protein | |||
| ??? | M | M.Ssp15303DcmP (100% identity) | M.EcoEc387Dcm2P | |
| 45760 | nuclease | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 33300 | IS5 family transposase | |||
| 33310 | R | SflN97McrCP (100% identity) | EcoEc387McrCP | |
| 33320 | R | SflN97McrBP (100% identity) | EcoEc387McrBP | |
| 33330 | 141 aa hypothetical protein | |||