Escherichia coli PK5074 |
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Putative Escherichia coli PK5074 RM systems
Ref: Mohsin,M. et al. unpublished
REBASE ref # 31850
| Sequence length: | GenBank #: | |
| Chromosome: | 4,781,220 bp | CP072802 |
| plasmid pPK5074-69kb: | 69,302 bp | CP072804 |
| plasmid pPK5074-MCR1: | 267,744 bp | CP072803 |
| plasmid pPK5074-tetX: | 110,313 bp | CP072807 |
REBASE acronym: Eco5074
Org_num: 46749
All begin J8617_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1080 | 388 aa hypothetical protein | |||
| 1085 | M | M.EcoEE7ORF9080P (100% identity) | M.Eco5074ORF1085P | |
| 1090 | S | S.EcoEE7ORF9080P (100% identity) | S.Eco5074ORF1085P | |
| 1095 | YecA family protein | |||
| 1100 | cold shock domain-containing protein | |||
| 1105 | R | EcoR10I (99% identity) | Eco5074ORF1085P | |
| 1110 | M48 family metallopeptidase | |||
| 11495 | restriction endonuclease | |||
| ??? | M | M.EcoZLWTORF20795P (100% identity) | M.Eco5074ORF11500P | |
| 11505 | S | S.EcoPSJ07ORF39270P (55% identity) | S1.Eco5074ORF11500P | |
| 11510 | IS3-like element IS3 family transposase | |||
| 11515 | S | S2.EcoL73ORF20410P (100% identity) | S2.Eco5074ORF11500P | |
| 11520 | R | EcoPSJ07ORF39270P (100% identity) | Eco5074ORF11500P | |
| 11525 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 770 | HD domain-containing protein | |||
| 775 | M | M.SflSTLE3DcmP (100% identity) | CCWGG | M.Eco5074DcmP |
| 780 | V | V.SflSTLE3DcmP (100% identity) | V.Eco5074DcmP | |
| 785 | drug/metabolite exporter YedA | |||
| 6665 | replication endonuclease | |||
| 6670 | M | M.Eco4224ORF16455P (100% identity) | GATC | M.Eco5074ORF6670P |
| 6675 | TraR/DksA family transcriptional regulator | |||
| 8390 | 343 aa hypothetical protein | |||
| 8395 | M | M.EcoMSI001ORF17885P (100% identity) | M.Eco5074ORF8395P | |
| 8400 | phage replication protein | |||
| 16375 | cell division protein DamX | |||
| 16380 | M | M.SspPIBDamP (100% identity) | GATC | M.Eco5074DamP |
| 16385 | ribulose-phosphate 3-epimerase | |||
| 17005 | DUF2556 family protein | |||
| 17010 | M | M.Sso8ORF2545P (100% identity) | ATGCAT | M.Eco5074ORF17010P |
| 17015 | DNA-binding transcriptional regulator Fis | |||
| plasmid pPK5074-69kb | ||||
| 24760 | DUF262 domain-containing protein | |||
| 24765 | RM | EcoVA2ORFFP (100% identity) | Eco5074ORF24765P | |
| 24770 | BREX-1 system phosphatase PglZ type A | |||
| plasmid pPK5074-MCR1 | ||||
| 23880 | 55 aa hypothetical protein | |||
| 23885 | M | M.YpsF1ORFCP (100% identity) | M.Eco5074ORF23885P | |
| 23890 | thermonuclease family protein | |||
| 24355 | 48 aa hypothetical protein | |||
| 24360 | M | M.YpsF1ORFBP (100% identity) | M.Eco5074ORF24360P | |
| 24365 | 202 aa hypothetical protein | |||
| 24485 | DNA-binding protein | |||
| 24490 | M | M.YpsF1ORFDP (100% identity) | M.Eco5074ORF24490P | |
| 24495 | 284 aa hypothetical protein | |||
| plasmid pPK5074-tetX | ||||
| 25605 | 102 aa hypothetical protein | |||
| 25610 | M | M.SenST46ORF25580P (100% identity) | M.Eco5074ORF25610P | |
| 25615 | 73 aa hypothetical protein | |||
| 25970 | IS1 family transposase | |||
| 25975 | M | M.SflSTLE4ORF22820P (100% identity) | CCWGG | M.Eco5074ORF25975P |
| 25980 | R | Ssp3CORF24390P (100% identity) | CCWGG | Eco5074ORF25975P |
| 25985 | IS6-like element IS26 family transposase | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| plasmid pPK5074-tetX | ||||
| 25510 | tRNA modification GTPase | |||
| 25515 | R | SspS13ORF650P (100% identity) | Eco5074ORF25520P | |
| 25520 | M | M.SspS13ORF650P (100% identity) | M.Eco5074ORF25520P | |
| 25525 | 67 aa hypothetical protein | |||