Escherichia coli QDFD216 |
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Putative Escherichia coli QDFD216 RM systems
Ref: Du,C. et al. Infect Drug Resist 13, 3649-3655 (2020)
REBASE ref # 31851
Complete sequence: 4,577,885 bp
GenBank #: CP053211
REBASE acronym: EcoD216
Org_num: 46750
All begin HJ589_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 6455 | PD-(D/E)XK nuclease family protein | |||
| 6460 | R | EcoW12E19ORF23680P (100% identity) | EcoD216ORF6465P | |
| 6465 | M | M.EcoW12E19ORF23680P (100% identity) | M.EcoD216ORF6465P | |
| 6470 | S | S.EcoW12E19ORF23680P (100% identity) | S.EcoD216ORF6465P | |
| 6475 | IS5-like element ISKpn26 family transposase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1685 | cell division protein DamX | |||
| 1690 | M | M.SspPIBDamP (100% identity) | GATC | M.EcoD216DamP |
| 1695 | ribulose-phosphate 3-epimerase | |||
| 2335 | DUF2556 family protein | |||
| 2340 | M | M.Sso8ORF2545P (100% identity) | ATGCAT | M.EcoD216ORF2340P |
| 2345 | DNA-binding transcriptional regulator Fis | |||
| 8435 | HD domain-containing protein | |||
| 8440 | M | M.SflSTLE3DcmP (100% identity) | CCWGG | M.EcoD216DcmP |
| 8445 | V | V.SflSTLE3DcmP (100% identity) | V.EcoD216DcmP | |
| 8450 | drug/metabolite exporter YedA | |||
| 13920 | replication endonuclease | |||
| 13925 | M | M.SspS13ORF8710P (100% identity) | GATC | M.EcoD216ORF13925P |
| 13930 | TraR/DksA family transcriptional regulator | |||
| 17120 | LexA family transcriptional regulator | |||
| 17125 | M | M.EcoT761ORF20590P (99% identity) | GATC | M.EcoD216ORF17125P |
| 17130 | PerC family transcriptional regulator | |||
| 17280 | transposase | |||
| 17285 | RM | SflLIN17ORF3140P (100% identity) | EcoD216ORF17285P | |
| 17290 | DEAD/DEAH box helicase | |||