Escherichia coli TCBK21G178 |
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Putative Escherichia coli TCBK21G178 RM systems
Ref: Lindemann,P.C. unpublished
REBASE ref # 31862
| Sequence length: | GenBank #: | |
| Chromosome: | 4,836,767 bp | CP048935 |
| plasmid unnamed: | 193,695 bp | CP048936 |
REBASE acronym: EcoG178
Org_num: 46804
All begin G4298_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 5985 | endoribonuclease SymE | |||
| ??? | S | S.Eco4839ORF40P (99% identity) | CAAYNNNNNNNGTRC | S.EcoG178ORF6000P |
| 6000 | M | M.SflTORF4636P (100% identity) | CAAYNNNNNNNGTRC | M.EcoG178ORF6000P |
| 6005 | R | EcoXH993ORF23720P (100% identity) | CAAYNNNNNNNGTRC | EcoG178ORF6000P |
| 6010 | DUF262 domain-containing protein | |||
| 21365 | cell filamentation protein Fic | |||
| 21370 | R | Eho333ORF19155P (100% identity) | EcoG178ORF21385P | |
| 21375 | DUF91 domain-containing protein | |||
| 21380 | S | S.SenS12VPHORF19925P (100% identity) | S.EcoG178ORF21385P | |
| 21385 | M | M.SenS12VPHORF19925P (100% identity) | M.EcoG178ORF21385P | |
| 21390 | 291 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 555 | DNA-binding transcriptional regulator Fis | |||
| 560 | M | M.Ssp28760ORF20045P (100% identity) | ATGCAT | M.EcoG178ORF560P |
| 565 | DUF2556 domain-containing protein | |||
| 1185 | ribulose-phosphate 3-epimerase | |||
| 1190 | M | M.UbaC1152DamP (100% identity) | GATC | M.EcoG178DamP |
| 1195 | cell division protein DamX | |||
| 16610 | drug/metabolite exporter YedA | |||
| 16615 | V | V.EcosPA11DcmP (99% identity) | V.EcoG178DcmP | |
| 16620 | M | M.SspS13DcmP (100% identity) | CCWGG | M.EcoG178DcmP |
| 16625 | phosphohydrolase | |||
| 17135 | NinE family protein | |||
| 17140 | M | M.SflN97ORF15810P (100% identity) | GATC | M.EcoG178ORF17140P |
| 17145 | recombination protein NinB | |||
| 19315 | NinE family protein | |||
| 19320 | M | M.SflN97ORF15810P (100% identity) | GATC | M.EcoG178ORF19320P |
| 19325 | recombination protein NinB | |||
| 19420 | 145 aa hypothetical protein | |||
| 19425 | M | M.EcoDEC9BORF4836P (98% identity) | M.EcoG178ORF19425P | |
| 19430 | ead/Ea22-like family protein | |||
| 20895 | replication endonuclease | |||
| 20900 | M | M.Eco8985ORF5991P (100% identity) | GATC | M.EcoG178ORF20900P |
| 20905 | TraR/DksA family transcriptional regulator | |||
| plasmid unnamed | ||||
| 24025 | 103 aa hypothetical protein | |||
| ??? | M | M.SenR219ORF25160P (96% identity) | M.EcoG178ORF24030P | |
| 24035 | DUF1380 domain-containing protein | |||
| 24415 | 102 aa hypothetical protein | |||
| 24420 | M | M.Sfl1602ORF27080P (100% identity) | M.EcoG178ORF24420P | |
| 24425 | 73 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 5975 | DUF1127 domain-containing protein | |||
| 5980 | R | Eco338GmrSDP (100% identity) | EcoG178GmrSDP | |
| 5985 | endoribonuclease SymE | |||