Escherichia coli SBF22 |
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Putative Escherichia coli SBF22 RM systems
Ref: Biggel,M. unpublished
REBASE ref # 31800
| Sequence length: | GenBank #: | |
| Chromosome: | 4,970,621 bp | CP067235 |
| plasmid pSBF22b: | 96,901 bp | CP067237 |
REBASE acronym: EcoSBF22
Org_num: 46798
All begin JJB19_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 17955 | NADPH-dependent aldehyde reductase Ahr | |||
| 17965 | R | EcoZ151ORF20915P (99% identity) | EcoSBF22ORF17975P | |
| ??? | S | S.EcoZ151ORF20915P (99% identity) | S.EcoSBF22ORF17975P | |
| 17975 | M | M.EcoZ151ORF20915P (100% identity) | M.EcoSBF22ORF17975P | |
| 17980 | DUF4942 domain-containing protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1365 | phosphohydrolase | |||
| 1370 | M | M.SflWW1DcmP (100% identity) | CCWGG | M.EcoSBF22DcmP |
| 1375 | V | V.SsoSE61DcmP (100% identity) | V.EcoSBF22DcmP | |
| 1380 | drug/metabolite exporter YedA | |||
| 8430 | PerC family transcriptional regulator | |||
| 8435 | M | M.Esp911AORF3194P (100% identity) | M.EcoSBF22ORF8435P | |
| 8440 | DUF1382 family protein | |||
| 12365 | DNA-binding transcriptional regulator Fis | |||
| 12370 | M | M.Ecost20ORFAP (100% identity) | ATGCAT | M.EcoSBF22ORF12370P |
| 12375 | DUF2556 family protein | |||
| 12895 | ribulose-phosphate 3-epimerase | |||
| 12900 | M | M.SspPIBDamP (100% identity) | GATC | M.EcoSBF22DamP |
| 12905 | cell division protein DamX | |||
| 17990 | McrC family protein | |||
| 17995 | R | EcoZ151ORF20895P (100% identity) | EcoSBF22ORF17995P | |
| 18000 | HNH endonuclease | |||
| 18420 | PerC family transcriptional regulator | |||
| 18425 | M | M.EcoW004ORF19230P (99% identity) | GATC | M.EcoSBF22ORF18425P |
| 18430 | LexA family transcriptional regulator | |||
| 18465 | 67 aa hypothetical protein | |||
| 18470 | M | M.Sso63633ORF22290P (100% identity) | M.EcoSBF22ORF18470P | |
| 18475 | phage lysis protein EssD | |||
| 20420 | recombination protein NinB | |||
| 20425 | M | M.SflWW1ORF7070P (100% identity) | GATC | M.EcoSBF22ORF20425P |
| 20430 | NinE family protein | |||
| plasmid pSBF22b | ||||
| 24905 | 55 aa hypothetical protein | |||
| 24910 | M | M.EcoJA03PORF1295P (98% identity) | M.EcoSBF22ORF24910P | |
| 24915 | recombination-associated protein RdgC | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 17980 | DUF4942 domain-containing protein | |||
| 17985 | R | EcoZ151McrBP (100% identity) | EcoSBF22McrBP | |
| 17990 | R | EcoZ151McrCP (100% identity) | EcoSBF22McrCP | |
| 17995 | HNH endonuclease | |||
| 18170 | DUF1127 domain-containing protein | |||
| 18175 | R | EcoM1721GmrSDP (100% identity) | EcoSBF22GmrSDP | |
| 18180 | endoribonuclease SymE | |||