Escherichia coli O176:H45 MIN9 |
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Putative Escherichia coli O176:H45 MIN9 RM systems
Ref: Majewski,P. Front Microbiol (2021) In press
REBASE ref # 31831
| Sequence length: | GenBank #: | |
| Chromosome: | 4,590,315 bp | CP069682 |
| plasmid pMUB-MIN9-1: | 283,245 bp | CP069683 |
| plasmid pMUB-MIN9-2: | 102,703 bp | CP069684 |
| plasmid pMUB-MIN9-3: | 5,792 bp | CP069686 |
REBASE acronym: EcoMIN9
Org_num: 46733
All begin JSU11_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3755 | extracellular solute-binding protein | |||
| 3760 | M | M.SflN101ORF19075P (99% identity) | GAACNNNNNTGC | M.EcoMIN9ORF3760P |
| 3765 | S | S.SflN101ORF19075P (100% identity) | GAACNNNNNTGC | S.EcoMIN9ORF3760P |
| 3770 | transposase domain-containing protein | |||
| 6705 | PD-(D/E)XK nuclease family protein | |||
| 6710 | R | EcoW12E19ORF23680P (100% identity) | EcoMIN9ORF6715P | |
| 6715 | M | M.EcoW12E19ORF23680P (99% identity) | M.EcoMIN9ORF6715P | |
| 6720 | S | S.EcoW12E19ORF23680P (100% identity) | S.EcoMIN9ORF6715P | |
| 6725 | IS5-like element ISKpn26 family transposase | |||
| plasmid pMUB-MIN9-2 | ||||
| 24080 | type II toxin-antitoxin system Phd/YefM family | |||
| 24085 | M | M.EcosS142ORF43560P (99% identity) | M.EcoMIN9ORF24085P | |
| 24090 | S | S1.EcoP61ORF22960P (100% identity) | S.EcoMIN9ORF24085P | |
| 24095 | R | EcoZ063ORF23860P (100% identity) | EcoMIN9ORF24085P | |
| 24100 | 3-phosphatase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1595 | cell division protein DamX | |||
| 1600 | M | M.SspPIBDamP (100% identity) | GATC | M.EcoMIN9DamP |
| 1605 | ribulose-phosphate 3-epimerase | |||
| 2235 | DUF2556 family protein | |||
| 2240 | M | M.Sso8ORF2545P (100% identity) | ATGCAT | M.EcoMIN9ORF2240P |
| 2245 | DNA-binding transcriptional regulator Fis | |||
| 8795 | helix-turn-helix domain-containing protein | |||
| 8800 | M | M.KpnyORFDP (100% identity) | M.EcoMIN9ORF8800P | |
| 8805 | RusA family crossover junction | |||
| 9050 | HD domain-containing protein | |||
| 9055 | M | M.SflSTLE3DcmP (100% identity) | CCWGG | M.EcoMIN9DcmP |
| 9060 | V | V.SflSTLE3DcmP (100% identity) | V.EcoMIN9DcmP | |
| 9065 | drug/metabolite exporter YedA | |||
| 14620 | replication endonuclease | |||
| 14625 | M | M.Ecop10BORF14750P (100% identity) | GATC | M.EcoMIN9ORF14625P |
| 14630 | TraR/DksA family transcriptional regulator | |||
| plasmid pMUB-MIN9-1 | ||||
| 22855 | 55 aa hypothetical protein | |||
| 22860 | M | M.YpsF1ORFCP (100% identity) | M.EcoMIN9ORF22860P | |
| 22865 | thermonuclease family protein | |||
| 23515 | 48 aa hypothetical protein | |||
| 23520 | M | M.YpsF1ORFBP (100% identity) | M.EcoMIN9ORF23520P | |
| 23525 | 202 aa hypothetical protein | |||
| 23670 | DNA-binding protein | |||
| 23675 | M | M.YpsF1ORFDP (100% identity) | M.EcoMIN9ORF23675P | |
| 23680 | 284 aa hypothetical protein | |||
| plasmid pMUB-MIN9-2 | ||||
| 23790 | XRE family transcriptional regulator | |||
| 23795 | R | SflFF67ORF22305P (100% identity) | GCWGC | EcoMIN9ORF23795P |
| 23800 | IS4-like element IS421 family transposase | |||
| plasmid pMUB-MIN9-3 | ||||
| 24405 | MbeD family mobilization/exclusion protein | |||
| 24410 | M | M.Efe33C07ORF24365P (100% identity) | M.EcoMIN9ORF24410P | |
| 24415 | R | Efe33C07ORF24365P (100% identity) | EcoMIN9ORF24410P | |
| 24420 | Rop family plasmid primer RNA-binding protein | |||