Escherichia coli O89m:H10 MIN12 |
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Putative Escherichia coli O89m:H10 MIN12 RM systems
Ref: Majewski,P. Front Microbiol (2021) In press
REBASE ref # 31831
| Sequence length: | GenBank #: | |
| Chromosome: | 4,896,568 bp | CP069657 |
| plasmid pMUB-MIN12-2: | 95,526 bp | CP069659 |
| plasmid pMUB-MIN12-3: | 61,257 bp | CP069660 |
REBASE acronym: EcoMIN12
Org_num: 46740
All begin JSU14_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 5710 | GTPase family protein | |||
| 5715 | M | M.Eco2BORF7975P (100% identity) | M.EcoMIN12ORF5715P | |
| 5720 | S | S.Ecos135ORF4440P (67% identity) | S.EcoMIN12ORF5715P | |
| 5725 | IS66-like element ISEc23 family transposase | |||
| 5730 | IS66 family insertion sequence element accessory | |||
| 5735 | IS66 family insertion sequence hypothetical | |||
| 5740 | R | Efe38C01ORF7960P (97% identity) | EcoMIN12ORF5715P | |
| 5745 | IS5 family transposase | |||
| 9745 | IS1 family transposase | |||
| 9750 | R | EcosNDM5ORF9185P (100% identity) | EcoMIN12ORF9750P | |
| 9755 | M48 family metallopeptidase | |||
| 21555 | IS3-like element ISSen4 family transposase | |||
| 21560 | R | EcotcmA3ORF16550P (100% identity) | EcoMIN12ORF21580P | |
| 21565 | DNA-processing protein DprA | |||
| 21570 | RecQ family ATP-dependent DNA helicase | |||
| 21575 | S | S.EcotcmA3ORF16550P (100% identity) | S.EcoMIN12ORF21580P | |
| 21580 | M | M.Pre393ORF2750P (100% identity) | M.EcoMIN12ORF21580P | |
| 21585 | helix-turn-helix domain-containing protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1625 | cell division protein DamX | |||
| 1630 | M | M.UbaC1152DamP (100% identity) | GATC | M.EcoMIN12DamP |
| 1635 | ribulose-phosphate 3-epimerase | |||
| 2255 | DUF2556 family protein | |||
| 2260 | M | M.Sso8ORF2545P (100% identity) | ATGCAT | M.EcoMIN12ORF2260P |
| 2265 | DNA-binding transcriptional regulator Fis | |||
| 9430 | phosphohydrolase | |||
| 9435 | M | M.SspS13DcmP (100% identity) | CCWGG | M.EcoMIN12DcmP |
| 9440 | V | V.SsoSE61DcmP (100% identity) | V.EcoMIN12DcmP | |
| 9445 | drug/metabolite exporter YedA | |||
| 12650 | 102 aa hypothetical protein | |||
| 12655 | M | M.Eco588ORF12245P (100% identity) | M.EcoMIN12ORF12655P | |
| 12660 | 77 aa hypothetical protein | |||
| 19750 | phage lysis protein EssD | |||
| 19755 | M | M.Sso63633ORF22290P (100% identity) | M.EcoMIN12ORF19755P | |
| 19760 | 67 aa hypothetical protein | |||
| 20165 | HNH endonuclease | |||
| 20170 | R | SflSTLE4ORF19250P (100% identity) | EcoMIN12ORF20170P | |
| 20175 | McrC family protein | |||
| 20455 | sigma 54-interacting transcriptional regulator | |||
| 20460 | R | SflFF87ORF20150P (100% identity) | EcoMIN12ORF20460P | |
| 20465 | IS21-like element IS100 family transposase | |||
| plasmid pMUB-MIN12-2 | ||||
| 24520 | 102 aa hypothetical protein | |||
| 24525 | M | M.Sso866ORF27155P (100% identity) | M.EcoMIN12ORF24525P | |
| 24530 | 73 aa hypothetical protein | |||
| plasmid pMUB-MIN12-3 | ||||
| 25030 | 103 aa hypothetical protein | |||
| 25035 | M | M.Ecos69ORF26765P (100% identity) | M.EcoMIN12ORF25035P | |
| 25040 | 73 aa hypothetical protein | |||