Escherichia coli RIVM_C030371 |
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Putative Escherichia coli RIVM_C030371 RM systems
Ref: Hendrickx,A.P.A. et al. unpublished
REBASE ref # 31854
Complete sequence: 5,348,975 bp
GenBank #: CP068827
REBASE acronym: Eco30371
Org_num: 46789
All begin JNN58_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 13145 | 265 aa hypothetical protein | |||
| 13150 | S | S.Eco29020ORF12915P (100% identity) | GACNNNNNNGATG | S.Eco30371ORF13155P |
| 13155 | M | M.VchVC22ORF1110P (100% identity) | GACNNNNNNGATG | M.Eco30371ORF13155P |
| 13160 | R | VchVC22ORF1110P (100% identity) | GACNNNNNNGATG | Eco30371ORF13155P |
| 13165 | helix-turn-helix domain-containing protein | |||
| 13510 | AAA family ATPase | |||
| 13515 | S | S.SflN116ORF3940P (100% identity) | CAAYNNNNNCTGC | S.Eco30371ORF13520P |
| 13520 | M | M.SflN116ORF3940P (100% identity) | CAAYNNNNNCTGC | M.Eco30371ORF13520P |
| 13525 | R | EcoCase6ORF480P (100% identity) | CAAYNNNNNCTGC | Eco30371ORF13520P |
| 13530 | MmcB family DNA repair protein | |||
| 18035 | endoribonuclease SymE | |||
| 18040 | R | Ecost88ORF20845P (100% identity) | GGYANNNNNGTNG | Eco30371ORF18050P |
| 18045 | S | S.Ecost88ORF20845P (100% identity) | GGYANNNNNGTNG | S.Eco30371ORF18050P |
| ??? | M | M.EcoSC054ORF4200P (100% identity) | GGYANNNNNGTNG | M.Eco30371ORF18050P |
| 18055 | restriction endonuclease | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 4040 | drug/metabolite exporter YedA | |||
| 4045 | V | V.SsoSE61DcmP (100% identity) | V.Eco30371DcmP | |
| 4050 | M | M.SsoSE61DcmP (100% identity) | CCWGG | M.Eco30371DcmP |
| 4055 | phosphohydrolase | |||
| 11100 | DNA-binding transcriptional regulator Fis | |||
| 11105 | M | M.Sdy12039ORFBP (100% identity) | ATGCAT | M.Eco30371ORF11105P |
| 11110 | DUF2556 family protein | |||
| 11645 | ribulose-phosphate 3-epimerase | |||
| 11650 | M | M.SspPIBDamP (100% identity) | GATC | M.Eco30371DamP |
| 11655 | cell division protein DamX | |||
| 25555 | TrmB family transcriptional regulator | |||
| 25560 | M | M.Sso1093ORF10290P (100% identity) | A | M.Eco30371ORF25560P |
| 25575 | DUF3927 family protein | |||