Escherichia coli RIVM_C029042 |
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Putative Escherichia coli RIVM_C029042 RM systems
Ref: Hendrickx,A.P.A. et al. unpublished
REBASE ref # 31854
Complete sequence: 5,188,564 bp
GenBank #: CP068819
REBASE acronym: Eco29042
Org_num: 46781
All begin JNN65_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 20820 | restriction endonuclease | |||
| ??? | M | M.EcoSC054ORF4200P (100% identity) | GGYANNNNNGTNG | M.Eco29042ORF20825P |
| 20830 | S | S.Ecost88ORF20845P (100% identity) | GGYANNNNNGTNG | S.Eco29042ORF20825P |
| 20835 | R | Ecost88ORF20845P (100% identity) | GGYANNNNNGTNG | Eco29042ORF20825P |
| 20840 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2070 | cell division protein DamX | |||
| 2075 | M | M.SspPIBDamP (100% identity) | GATC | M.Eco29042DamP |
| 2080 | ribulose-phosphate 3-epimerase | |||
| 2605 | DUF2556 family protein | |||
| 2610 | M | M.Sdy12039ORFBP (100% identity) | ATGCAT | M.Eco29042ORF2610P |
| 2615 | DNA-binding transcriptional regulator Fis | |||
| 4260 | conjugal transfer protein TraD | |||
| 4265 | V | V.Kpn22265ORF23705P (99% identity) | V.Eco29042ORF4270P | |
| 4270 | M | M.KquU41ORF24735P (100% identity) | GCGCGC | M.Eco29042ORF4270P |
| 4275 | R | Mmo12289ORF1444P (100% identity) | GCGCGC | Eco29042ORF4270P |
| 4280 | 211 aa hypothetical protein | |||
| 10145 | hydrolase | |||
| 10150 | M | M.SflSTLE1DcmP (100% identity) | CCWGG | M.Eco29042DcmP |
| 10155 | V | V.SsoSE61DcmP (100% identity) | V.Eco29042DcmP | |
| 10160 | drug/metabolite exporter YedA | |||