Escherichia coli RIVM_C029020 |
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Putative Escherichia coli RIVM_C029020 RM systems
Ref: Hendrickx,A.P.A. et al. unpublished
REBASE ref # 31854
Complete sequence: 5,251,089 bp
GenBank #: CP068812
REBASE acronym: Eco29020
Org_num: 46779
All begin JNN61_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 12905 | 265 aa hypothetical protein | |||
| 12910 | S | S.Eco30371ORF13155P (100% identity) | GACNNNNNNGATG | S.Eco29020ORF12915P |
| 12915 | M | M.VchVC22ORF1110P (100% identity) | GACNNNNNNGATG | M.Eco29020ORF12915P |
| 12920 | R | VchVC22ORF1110P (100% identity) | GACNNNNNNGATG | Eco29020ORF12915P |
| 12925 | helix-turn-helix domain-containing protein | |||
| 13270 | AAA family ATPase | |||
| 13275 | S | S.SflN116ORF3940P (100% identity) | CAAYNNNNNCTGC | S.Eco29020ORF13280P |
| 13280 | M | M.SflN116ORF3940P (100% identity) | CAAYNNNNNCTGC | M.Eco29020ORF13280P |
| 13285 | R | EcoCase6ORF480P (100% identity) | CAAYNNNNNCTGC | Eco29020ORF13280P |
| 13290 | MmcB family DNA repair protein | |||
| 17800 | endoribonuclease SymE | |||
| 17805 | R | Ecost88ORF20845P (100% identity) | GGYANNNNNGTNG | Eco29020ORF17815P |
| 17810 | S | S.Ecost88ORF20845P (100% identity) | GGYANNNNNGTNG | S.Eco29020ORF17815P |
| ??? | M | M.EcoSC054ORF4200P (100% identity) | GGYANNNNNGTNG | M.Eco29020ORF17815P |
| 17820 | restriction endonuclease | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 4035 | drug/metabolite exporter YedA | |||
| 4040 | V | V.SsoSE61DcmP (100% identity) | V.Eco29020DcmP | |
| 4045 | M | M.SsoSE61DcmP (100% identity) | CCWGG | M.Eco29020DcmP |
| 4050 | phosphohydrolase | |||
| 10860 | DNA-binding transcriptional regulator Fis | |||
| 10865 | M | M.Sdy12039ORFBP (100% identity) | ATGCAT | M.Eco29020ORF10865P |
| 10870 | DUF2556 family protein | |||
| 11405 | ribulose-phosphate 3-epimerase | |||
| 11410 | M | M.SspPIBDamP (100% identity) | GATC | M.Eco29020DamP |
| 11415 | cell division protein DamX | |||
| 24890 | TrmB family transcriptional regulator | |||
| 24895 | M | M.Sso1093ORF10290P (100% identity) | A | M.Eco29020ORF24895P |
| 24910 | DUF3927 family protein | |||