Escherichia coli RIVM_C018576 |
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Putative Escherichia coli RIVM_C018576 RM systems
Ref: Hendrickx,A.P.A. et al. unpublished
REBASE ref # 31854
Complete sequence: 5,089,794 bp
GenBank #: CP068806
REBASE acronym: Eco18576
Org_num: 46767
All begin JNN57_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 2575 | endoribonuclease SymE | |||
| 2580 | S | S.Ecos69ORF1130P (100% identity) | AACNNNNNNGTGC | S.Eco18576ORF2585P |
| 2585 | M | M.Ecos69ORF1130P (100% identity) | AACNNNNNNGTGC | M.Eco18576ORF2585P |
| 2590 | R | Ecoo241ORF21620P (100% identity) | AACNNNNNNGTGC | Eco18576ORF2585P |
| 2595 | adenine/cytosine-specific restriction | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 9505 | recombination protein NinB | |||
| 9510 | M | M.SflWW1ORF7070P (100% identity) | GATC | M.Eco18576ORF9510P |
| 9515 | NinE family protein | |||
| 13750 | drug/metabolite exporter YedA | |||
| 13755 | V | V.Ecostr9DcmP (74% identity) | V.Eco18576DcmP | |
| 13760 | M | M.EcosE1DcmP (100% identity) | CCWGG | M.Eco18576DcmP |
| 13765 | phosphohydrolase | |||
| 20900 | DNA-binding transcriptional regulator Fis | |||
| 20905 | M | M.Eco558ORF21475P (100% identity) | ATGCAT | M.Eco18576ORF20905P |
| 20910 | DUF2556 family protein | |||
| 21430 | ribulose-phosphate 3-epimerase | |||
| 21435 | M | M.Ecos69DamP (100% identity) | GATC | M.Eco18576DamP |
| 21440 | cell division protein DamX | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2565 | R | Ecoo241McrCP (100% identity) | Eco18576McrCP | |
| 2570 | R | SenHNK130McrBP (100% identity) | Eco18576McrBP | |
| 2575 | endoribonuclease SymE | |||
| 2590 | type I restriction-modification system | |||
| 2595 | R | Ssp28760MrrP (100% identity) | Eco18576MrrP | |
| 2600 | GTPase | |||