Escherichia coli RIVM_C017997 |
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Putative Escherichia coli RIVM_C017997 RM systems
Ref: Hendrickx,A.P.A. et al. unpublished
REBASE ref # 31854
Complete sequence: 5,174,511 bp
GenBank #: CP068800
REBASE acronym: Eco17997
Org_num: 46760
All begin JNN45_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 21140 | restriction endonuclease | |||
| ??? | M | M.EcoSC054ORF4200P (100% identity) | GGYANNNNNGTNG | M.Eco17997ORF21145P |
| 21150 | S | S.Ecost88ORF20845P (100% identity) | GGYANNNNNGTNG | S.Eco17997ORF21145P |
| 21155 | R | Ecost88ORF20845P (100% identity) | GGYANNNNNGTNG | Eco17997ORF21145P |
| 21160 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1825 | cell division protein DamX | |||
| 1830 | M | M.SspPIBDamP (100% identity) | GATC | M.Eco17997DamP |
| 1835 | ribulose-phosphate 3-epimerase | |||
| 2360 | DUF2556 family protein | |||
| 2365 | M | M.Sdy12039ORFBP (100% identity) | ATGCAT | M.Eco17997ORF2365P |
| 2370 | DNA-binding transcriptional regulator Fis | |||
| 4475 | integrase | |||
| 4480 | M | M.SflFF80ORF21000P (100% identity) | YGGCCR | M.Eco17997ORF4480P |
| 4485 | R | SflFF80ORF21000P (100% identity) | YGGCCR | Eco17997ORF4480P |
| 4490 | IS3 family transposase | |||
| 10685 | phosphohydrolase | |||
| 10690 | M | M.Ecou021DcmP (100% identity) | CCWGG | M.Eco17997DcmP |
| 10695 | V | V.SsoSE61DcmP (100% identity) | V.Eco17997DcmP | |
| 10700 | drug/metabolite exporter YedA | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 10475 | shufflon system plasmid conjugative transfer | |||
| 10480 | R | EcoH117ORF26340P (100% identity) | Eco17997ORF10485P | |
| 10485 | M | M.Sensp14178ORF9290P (100% identity) | M.Eco17997ORF10485P | |
| 10490 | integrase arm-type DNA-binding domain-containing | |||