Escherichia coli RIVM_C012087 |
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Putative Escherichia coli RIVM_C012087 RM systems
Ref: Hendrickx,A.P.A. et al. unpublished
REBASE ref # 31854
Complete sequence: 5,185,152 bp
GenBank #: CP068796
REBASE acronym: Eco12087
Org_num: 46755
All begin JNN38_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 21210 | restriction endonuclease | |||
| ??? | M | M.EcoSC054ORF4200P (100% identity) | GGYANNNNNGTNG | M.Eco12087ORF21215P |
| 21220 | S | S.Ecost88ORF20845P (100% identity) | GGYANNNNNGTNG | S.Eco12087ORF21215P |
| 21225 | R | Ecost88ORF20845P (100% identity) | GGYANNNNNGTNG | Eco12087ORF21215P |
| 21230 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1825 | cell division protein DamX | |||
| 1830 | M | M.SspPIBDamP (100% identity) | GATC | M.Eco12087DamP |
| 1835 | ribulose-phosphate 3-epimerase | |||
| 2360 | DUF2556 family protein | |||
| 2365 | M | M.Sdy12039ORFBP (100% identity) | ATGCAT | M.Eco12087ORF2365P |
| 2370 | DNA-binding transcriptional regulator Fis | |||
| 10450 | phosphohydrolase | |||
| 10455 | M | M.Ecou021DcmP (100% identity) | CCWGG | M.Eco12087DcmP |
| 10460 | V | V.SsoSE61DcmP (100% identity) | V.Eco12087DcmP | |
| 10465 | drug/metabolite exporter YedA | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 10240 | shufflon system plasmid conjugative transfer | |||
| 10245 | R | EcoH117ORF26340P (100% identity) | Eco12087ORF10250P | |
| 10250 | M | M.Sensp14178ORF9290P (100% identity) | M.Eco12087ORF10250P | |
| 10255 | integrase arm-type DNA-binding domain-containing | |||