Escherichia coli O157:H7 Z852 |
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Putative Escherichia coli O157:H7 Z852 RM systems
Ref: Fitzgerald,S. et al. unpublished
REBASE ref # 31844
| Sequence length: | GenBank #: | |
| Chromosome: | 5,459,114 bp | CP062769 |
| plasmid pZ852-1: | 95,208 bp | CP062770 |
REBASE acronym: EcoZ852
Org_num: 46725
All begin ILQ33_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 23780 | DUF262 domain-containing protein | |||
| 23785 | R | Ecos1613ORF27060P (100% identity) | CACNNNNNNNCTGG | EcoZ852ORF23790P |
| 23790 | M | M.EcosPA8ORF17615P (100% identity) | CACNNNNNNNCTGG | M.EcoZ852ORF23790P |
| 23795 | S | S.EcosPA8ORF17615P (100% identity) | CACNNNNNNNCTGG | S.EcoZ852ORF23790P |
| 23800 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2290 | cell division protein DamX | |||
| 2295 | M | M.UbaC1152DamP (100% identity) | GATC | M.EcoZ852DamP |
| 2300 | ribulose-phosphate 3-epimerase | |||
| 2805 | DUF2556 family protein | |||
| 2810 | M | M.EcosPA8ORF11510P (100% identity) | ATGCAT | M.EcoZ852ORF2810P |
| 2815 | DNA-binding transcriptional regulator Fis | |||
| 7665 | recombination protein NinB | |||
| 7670 | M | M.SflWW1ORF7070P (100% identity) | GATC | M.EcoZ852ORF7670P |
| 7675 | NinE family protein | |||
| 10120 | recombination protein NinB | |||
| 10125 | M | M.Eph2851ORFAP (100% identity) | GATC | M.EcoZ852ORF10125P |
| 10130 | NinE family protein | |||
| 10925 | phosphohydrolase | |||
| 10930 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.EcoZ852DcmP |
| 10935 | V | V.EcosPA8DcmP (100% identity) | V.EcoZ852DcmP | |
| 10940 | drug/metabolite exporter YedA | |||
| 13100 | epoxyqueuosine reductase QueH | |||
| 13105 | M | M.EcoZ910ORF13770P (100% identity) | GCCGGC | M.EcoZ852ORF13105P |
| 13110 | R | EcoZ910ORF13770P (100% identity) | GCCGGC | EcoZ852ORF13105P |
| 13115 | 90 aa hypothetical protein | |||
| 13135 | TrmB family transcriptional regulator | |||
| 13140 | M | M.EcoZ910ORF13805P (100% identity) | M.EcoZ852ORF13140P | |
| 13145 | DUF1737 domain-containing protein | |||
| 24030 | RM | EcosPA8ORF17390P (100% identity) | GAAABCC | EcoZ852ORF24030P |
| 24035 | DEAD/DEAH box helicase | |||
| 24065 | N-acetylneuraminic acid mutarotase | |||
| 24070 | R | Ecos1613ORF26795P (100% identity) | EcoZ852ORF24070P | |
| 24075 | transposase | |||
| plasmid pZ852-1 | ||||
| 27255 | 101 aa hypothetical protein | |||
| 27260 | M | M.EcosPA8ORF27775P (100% identity) | M.EcoZ852ORF27260P | |
| 27265 | 73 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 23800 | endoribonuclease SymE | |||
| 23805 | R | EcosPA8GmrSDP (55% identity) | EcoZ852GmrDP | |
| 23810 | R | Ecos1613GmrSP (100% identity) | EcoZ852GmrSP | |
| 23815 | DUF1127 domain-containing protein | |||