Escherichia coli O157:H7 Z887 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Escherichia coli O157:H7 Z887 RM systems
Ref: Fitzgerald,S. et al. unpublished
REBASE ref # 31844
| Sequence length: | GenBank #: | |
| Chromosome: | 5,533,025 bp | CP062761 |
| plasmid pZ887-1: | 92,756 bp | CP062762 |
REBASE acronym: EcoZ887
Org_num: 46729
All begin ILQ37_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 24265 | DUF262 domain-containing protein | |||
| 24270 | R | Ecos1613ORF27060P (100% identity) | CACNNNNNNNCTGG | EcoZ887ORF24275P |
| 24275 | M | M.EcosPA8ORF17615P (100% identity) | CACNNNNNNNCTGG | M.EcoZ887ORF24275P |
| 24280 | S | S.EcosPA8ORF17615P (100% identity) | CACNNNNNNNCTGG | S.EcoZ887ORF24275P |
| 24285 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2290 | cell division protein DamX | |||
| 2295 | M | M.UbaC1152DamP (100% identity) | GATC | M.EcoZ887DamP |
| 2300 | ribulose-phosphate 3-epimerase | |||
| 2805 | DUF2556 family protein | |||
| 2810 | M | M.EcosPA8ORF11510P (100% identity) | ATGCAT | M.EcoZ887ORF2810P |
| 2815 | DNA-binding transcriptional regulator Fis | |||
| 7665 | recombination protein NinB | |||
| 7670 | M | M.SflWW1ORF7070P (100% identity) | GATC | M.EcoZ887ORF7670P |
| 7675 | NinE family protein | |||
| 10110 | recombination protein NinB | |||
| 10115 | M | M.Eph2851ORFAP (100% identity) | GATC | M.EcoZ887ORF10115P |
| 10120 | NinE family protein | |||
| 10915 | phosphohydrolase | |||
| 10920 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.EcoZ887DcmP |
| 10925 | V | V.EcosPA8DcmP (100% identity) | V.EcoZ887DcmP | |
| 10930 | drug/metabolite exporter YedA | |||
| 14215 | TrmB family transcriptional regulator | |||
| 14220 | M | M.EcosPA8ORF27255P (100% identity) | M.EcoZ887ORF14220P | |
| 14235 | DUF1737 domain-containing protein | |||
| 14500 | epoxyqueuosine reductase QueH | |||
| 14505 | M | M.EcoZ910ORF13770P (100% identity) | GCCGGC | M.EcoZ887ORF14505P |
| 14510 | R | EcoZ910ORF13770P (100% identity) | GCCGGC | EcoZ887ORF14505P |
| 14515 | 90 aa hypothetical protein | |||
| 14535 | TrmB family transcriptional regulator | |||
| 14540 | M | M.EcoZ910ORF13805P (100% identity) | M.EcoZ887ORF14540P | |
| 14545 | DUF1737 domain-containing protein | |||
| 24515 | RM | EcosPA8ORF17390P (100% identity) | GAAABCC | EcoZ887ORF24515P |
| 24520 | DEAD/DEAH box helicase | |||
| 24550 | N-acetylneuraminic acid mutarotase | |||
| 24555 | R | Ecos1613ORF26795P (100% identity) | EcoZ887ORF24555P | |
| 24560 | transposase | |||
| plasmid pZ887-1 | ||||
| 27720 | 101 aa hypothetical protein | |||
| 27725 | M | M.EcosPA8ORF27775P (100% identity) | M.EcoZ887ORF27725P | |
| 27730 | 73 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 24285 | endoribonuclease SymE | |||
| 24290 | R | EcosPA8GmrSDP (55% identity) | EcoZ887GmrDP | |
| 24295 | R | Ecos1613GmrSP (100% identity) | EcoZ887GmrSP | |
| 24300 | DUF1127 domain-containing protein | |||