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Putative Escherichia coli O157:H7 Z910 RM systems
Ref: Fitzgerald,S. et al. unpublished
REBASE ref # 31844
Sequence length: | GenBank #: | |
Chromosome: | 5,504,700 bp | CP062752 |
plasmid pZ910-1: | 92,772 bp | CP062753 |
REBASE acronym: EcoZ910
Org_num: 46732
All begin ILQ40_
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
24075 | DUF262 domain-containing protein | |||
24080 | R | Ecos1613ORF27060P (100% identity) | CACNNNNNNNCTGG | EcoZ910ORF24085P |
24085 | M | M.EcosPA8ORF17615P (100% identity) | CACNNNNNNNCTGG | M.EcoZ910ORF24085P |
24090 | S | S.EcosPA8ORF17615P (100% identity) | CACNNNNNNNCTGG | S.EcoZ910ORF24085P |
24095 | endoribonuclease SymE | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
2290 | cell division protein DamX | |||
2295 | M | M.UbaC1152DamP (100% identity) | GATC | M.EcoZ910DamP |
2300 | ribulose-phosphate 3-epimerase | |||
2805 | DUF2556 family protein | |||
2810 | M | M.EcosPA8ORF11510P (100% identity) | ATGCAT | M.EcoZ910ORF2810P |
2815 | DNA-binding transcriptional regulator Fis | |||
7685 | recombination protein NinB | |||
7690 | M | M.SflWW1ORF7070P (100% identity) | GATC | M.EcoZ910ORF7690P |
7695 | NinE family protein | |||
10130 | recombination protein NinB | |||
10135 | M | M.Eph2851ORFAP (100% identity) | GATC | M.EcoZ910ORF10135P |
10140 | NinE family protein | |||
10935 | phosphohydrolase | |||
10940 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.EcoZ910DcmP |
10945 | V | V.EcosPA8DcmP (100% identity) | V.EcoZ910DcmP | |
10950 | drug/metabolite exporter YedA | |||
13150 | TrmB family transcriptional regulator | |||
13155 | M | M.EcosPA8ORF27255P (100% identity) | M.EcoZ910ORF13155P | |
13170 | DUF1737 domain-containing protein | |||
13765 | epoxyqueuosine reductase QueH | |||
13770 | M | M.EcoZ903ORF11895P (100% identity) | GCCGGC | M.EcoZ910ORF13770P |
13775 | R | EcoZ903ORF11895P (100% identity) | GCCGGC | EcoZ910ORF13770P |
13780 | 90 aa hypothetical protein | |||
13800 | TrmB family transcriptional regulator | |||
13805 | M | M.EcoZ903ORF11860P (100% identity) | M.EcoZ910ORF13805P | |
13810 | DUF1737 domain-containing protein | |||
24325 | RM | EcosPA8ORF17390P (100% identity) | GAAABCC | EcoZ910ORF24325P |
24330 | DEAD/DEAH box helicase | |||
24360 | N-acetylneuraminic acid mutarotase | |||
24365 | R | Ecos1613ORF26795P (100% identity) | EcoZ910ORF24365P | |
24370 | transposase | |||
plasmid pZ910-1 | ||||
27535 | 101 aa hypothetical protein | |||
27540 | M | M.EcosPA8ORF27775P (100% identity) | M.EcoZ910ORF27540P | |
27545 | 73 aa hypothetical protein | |||
Type IV | ||||
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
24095 | endoribonuclease SymE | |||
24100 | R | EcosPA8GmrSDP (55% identity) | EcoZ910GmrDP | |
24105 | R | Ecos1613GmrSP (100% identity) | EcoZ910GmrSP | |
24110 | DUF1127 domain-containing protein |