Escherichia coli O157:H7 Z1504 |
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Putative Escherichia coli O157:H7 Z1504 RM systems
Ref: Fitzgerald,S. et al. unpublished
REBASE ref # 31844
| Sequence length: | GenBank #: | |
| Chromosome: | 5,504,628 bp | CP062746 |
| plasmid pZ1504-1: | 92,765 bp | CP062747 |
REBASE acronym: EcoZ1504
Org_num: 46700
All begin ILQ42_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 24065 | DUF262 domain-containing protein | |||
| 24070 | R | Ecos1613ORF27060P (100% identity) | CACNNNNNNNCTGG | EcoZ1504ORF24075P |
| 24075 | M | M.EcosPA8ORF17615P (100% identity) | CACNNNNNNNCTGG | M.EcoZ1504ORF24075P |
| 24080 | S | S.EcosPA8ORF17615P (100% identity) | CACNNNNNNNCTGG | S.EcoZ1504ORF24075P |
| 24085 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2290 | cell division protein DamX | |||
| 2295 | M | M.UbaC1152DamP (100% identity) | GATC | M.EcoZ1504DamP |
| 2300 | ribulose-phosphate 3-epimerase | |||
| 2805 | DUF2556 family protein | |||
| 2810 | M | M.EcosPA8ORF11510P (100% identity) | ATGCAT | M.EcoZ1504ORF2810P |
| 2815 | DNA-binding transcriptional regulator Fis | |||
| 7660 | recombination protein NinB | |||
| 7665 | M | M.SflWW1ORF7070P (100% identity) | GATC | M.EcoZ1504ORF7665P |
| 7670 | NinE family protein | |||
| 10105 | recombination protein NinB | |||
| 10110 | M | M.Eph2851ORFAP (100% identity) | GATC | M.EcoZ1504ORF10110P |
| 10115 | NinE family protein | |||
| 15215 | DUF1737 domain-containing protein | |||
| 15220 | M | M.EcoZ910ORF13805P (100% identity) | M.EcoZ1504ORF15220P | |
| 15225 | TrmB family transcriptional regulator | |||
| 15245 | 90 aa hypothetical protein | |||
| 15250 | R | EcoZ910ORF13770P (100% identity) | GCCGGC | EcoZ1504ORF15255P |
| 15255 | M | M.EcoZ910ORF13770P (100% identity) | GCCGGC | M.EcoZ1504ORF15255P |
| 15260 | epoxyqueuosine reductase QueH | |||
| 15855 | DUF1737 domain-containing protein | |||
| 15870 | M | M.EcosPA8ORF27255P (100% identity) | M.EcoZ1504ORF15870P | |
| 15875 | TrmB family transcriptional regulator | |||
| 18075 | drug/metabolite exporter YedA | |||
| 18080 | V | V.EcosPA8DcmP (100% identity) | V.EcoZ1504DcmP | |
| 18085 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.EcoZ1504DcmP |
| 18090 | phosphohydrolase | |||
| 24315 | RM | EcosPA8ORF17390P (100% identity) | GAAABCC | EcoZ1504ORF24315P |
| 24320 | DEAD/DEAH box helicase | |||
| 24350 | N-acetylneuraminic acid mutarotase | |||
| 24355 | R | Ecos1613ORF26795P (100% identity) | EcoZ1504ORF24355P | |
| 24360 | transposase | |||
| plasmid pZ1504-1 | ||||
| 27535 | 101 aa hypothetical protein | |||
| 27540 | M | M.EcosPA8ORF27775P (100% identity) | M.EcoZ1504ORF27540P | |
| 27545 | 73 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 24085 | endoribonuclease SymE | |||
| 24090 | R | EcosPA8GmrSDP (55% identity) | EcoZ1504GmrDP | |
| 24095 | R | Ecos1613GmrSP (100% identity) | EcoZ1504GmrSP | |
| 24100 | DUF1127 domain-containing protein | |||