Escherichia coli O157:H7 Z1626 |
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Putative Escherichia coli O157:H7 Z1626 RM systems
Ref: Fitzgerald,S. et al. unpublished
REBASE ref # 31844
| Sequence length: | GenBank #: | |
| Chromosome: | 5,516,530 bp | CP062742 |
| plasmid pZ1626-1: | 92,746 bp | CP062743 |
REBASE acronym: EcoZ1626
Org_num: 46702
All begin ILQ44_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 24140 | DUF262 domain-containing protein | |||
| 24145 | R | Ecos1613ORF27060P (100% identity) | CACNNNNNNNCTGG | EcoZ1626ORF24150P |
| 24150 | M | M.EcosPA8ORF17615P (100% identity) | CACNNNNNNNCTGG | M.EcoZ1626ORF24150P |
| 24155 | S | S.EcosPA8ORF17615P (100% identity) | CACNNNNNNNCTGG | S.EcoZ1626ORF24150P |
| 24160 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2300 | cell division protein DamX | |||
| 2305 | M | M.UbaC1152DamP (100% identity) | GATC | M.EcoZ1626DamP |
| 2310 | ribulose-phosphate 3-epimerase | |||
| 2815 | DUF2556 family protein | |||
| 2820 | M | M.EcosPA8ORF11510P (100% identity) | ATGCAT | M.EcoZ1626ORF2820P |
| 2825 | DNA-binding transcriptional regulator Fis | |||
| 7680 | recombination protein NinB | |||
| 7685 | M | M.SflWW1ORF7070P (100% identity) | GATC | M.EcoZ1626ORF7685P |
| 7690 | NinE family protein | |||
| 10125 | recombination protein NinB | |||
| 10130 | M | M.Eph2851ORFAP (100% identity) | GATC | M.EcoZ1626ORF10130P |
| 10135 | NinE family protein | |||
| 10930 | phosphohydrolase | |||
| 10935 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.EcoZ1626DcmP |
| 10940 | V | V.EcosPA8DcmP (100% identity) | V.EcoZ1626DcmP | |
| 10945 | drug/metabolite exporter YedA | |||
| 13755 | epoxyqueuosine reductase QueH | |||
| 13760 | M | M.EcoZ910ORF13770P (100% identity) | GCCGGC | M.EcoZ1626ORF13760P |
| 13765 | R | EcoZ910ORF13770P (100% identity) | GCCGGC | EcoZ1626ORF13760P |
| 13770 | 90 aa hypothetical protein | |||
| 13790 | TrmB family transcriptional regulator | |||
| 13795 | M | M.EcoZ910ORF13805P (100% identity) | M.EcoZ1626ORF13795P | |
| 13800 | DUF1737 domain-containing protein | |||
| 15465 | DUF1737 domain-containing protein | |||
| 15480 | M | M.EcosPA8ORF27255P (100% identity) | M.EcoZ1626ORF15480P | |
| 15485 | TrmB family transcriptional regulator | |||
| 24390 | RM | EcosPA8ORF17390P (100% identity) | GAAABCC | EcoZ1626ORF24390P |
| 24395 | DEAD/DEAH box helicase | |||
| 24425 | N-acetylneuraminic acid mutarotase | |||
| 24430 | R | Ecos1613ORF26795P (100% identity) | EcoZ1626ORF24430P | |
| 24435 | transposase | |||
| plasmid pZ1626-1 | ||||
| 27600 | 101 aa hypothetical protein | |||
| 27605 | M | M.EcosPA8ORF27775P (100% identity) | M.EcoZ1626ORF27605P | |
| 27610 | 73 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 24160 | endoribonuclease SymE | |||
| 24165 | R | EcosPA8GmrSDP (55% identity) | EcoZ1626GmrDP | |
| 24170 | R | Ecos1613GmrSP (100% identity) | EcoZ1626GmrSP | |
| 24175 | DUF1127 domain-containing protein | |||