Escherichia coli O157:H7 Z1813 |
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Putative Escherichia coli O157:H7 Z1813 RM systems
Ref: Fitzgerald,S. et al. unpublished
REBASE ref # 31844
| Sequence length: | GenBank #: | |
| Chromosome: | 5,591,596 bp | CP062725 |
| plasmid pZ1813-1: | 92,762 bp | CP062726 |
REBASE acronym: EcoZ1813
Org_num: 46710
All begin ILQ52_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 24690 | DUF262 domain-containing protein | |||
| 24695 | R | Ecos1613ORF27060P (100% identity) | CACNNNNNNNCTGG | EcoZ1813ORF24700P |
| 24700 | M | M.EcosPA8ORF17615P (100% identity) | CACNNNNNNNCTGG | M.EcoZ1813ORF24700P |
| 24705 | S | S.EcosPA8ORF17615P (100% identity) | CACNNNNNNNCTGG | S.EcoZ1813ORF24700P |
| 24710 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2290 | cell division protein DamX | |||
| 2295 | M | M.UbaC1152DamP (100% identity) | GATC | M.EcoZ1813DamP |
| 2300 | ribulose-phosphate 3-epimerase | |||
| 2805 | DUF2556 family protein | |||
| 2810 | M | M.EcosPA8ORF11510P (100% identity) | ATGCAT | M.EcoZ1813ORF2810P |
| 2815 | DNA-binding transcriptional regulator Fis | |||
| 7685 | recombination protein NinB | |||
| 7690 | M | M.SflWW1ORF7070P (100% identity) | GATC | M.EcoZ1813ORF7690P |
| 7695 | NinE family protein | |||
| 10130 | recombination protein NinB | |||
| 10135 | M | M.Eph2851ORFAP (100% identity) | GATC | M.EcoZ1813ORF10135P |
| 10140 | NinE family protein | |||
| 10935 | phosphohydrolase | |||
| 10940 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.EcoZ1813DcmP |
| 10945 | V | V.EcosPA8DcmP (100% identity) | V.EcoZ1813DcmP | |
| 10950 | drug/metabolite exporter YedA | |||
| 13445 | TrmB family transcriptional regulator | |||
| 13450 | M | M.EcosPA8ORF27255P (100% identity) | M.EcoZ1813ORF13450P | |
| 13465 | DUF1737 domain-containing protein | |||
| 14060 | epoxyqueuosine reductase QueH | |||
| 14065 | M | M.EcoZ910ORF13770P (100% identity) | GCCGGC | M.EcoZ1813ORF14065P |
| 14070 | R | EcoZ910ORF13770P (100% identity) | GCCGGC | EcoZ1813ORF14065P |
| 14075 | 90 aa hypothetical protein | |||
| 14095 | TrmB family transcriptional regulator | |||
| 14100 | M | M.EcoZ910ORF13805P (100% identity) | M.EcoZ1813ORF14100P | |
| 14105 | DUF1737 domain-containing protein | |||
| 24940 | RM | EcosPA8ORF17390P (100% identity) | GAAABCC | EcoZ1813ORF24940P |
| 24945 | DEAD/DEAH box helicase | |||
| 24975 | N-acetylneuraminic acid mutarotase | |||
| 24980 | R | Ecos1613ORF26795P (100% identity) | EcoZ1813ORF24980P | |
| 24985 | transposase | |||
| plasmid pZ1813-1 | ||||
| 28150 | 101 aa hypothetical protein | |||
| 28155 | M | M.EcosPA8ORF27775P (100% identity) | M.EcoZ1813ORF28155P | |
| 28160 | 73 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 24710 | endoribonuclease SymE | |||
| 24715 | R | EcosPA8GmrSDP (55% identity) | EcoZ1813GmrDP | |
| 24720 | R | Ecos1613GmrSP (100% identity) | EcoZ1813GmrSP | |
| 24725 | DUF1127 domain-containing protein | |||