Escherichia coli O157:H7 Z1814 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Escherichia coli O157:H7 Z1814 RM systems
Ref: Fitzgerald,S. et al. unpublished
REBASE ref # 31844
| Sequence length: | GenBank #: | |
| Chromosome: | 5,519,504 bp | CP062723 |
| plasmid pZ1814-1: | 92,747 bp | CP062724 |
REBASE acronym: EcoZ1814
Org_num: 46711
All begin ILQ53_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 24190 | DUF262 domain-containing protein | |||
| 24195 | R | Ecos1613ORF27060P (100% identity) | CACNNNNNNNCTGG | EcoZ1814ORF24200P |
| 24200 | M | M.EcosPA8ORF17615P (100% identity) | CACNNNNNNNCTGG | M.EcoZ1814ORF24200P |
| 24205 | S | S.EcosPA8ORF17615P (100% identity) | CACNNNNNNNCTGG | S.EcoZ1814ORF24200P |
| 24210 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2290 | cell division protein DamX | |||
| 2295 | M | M.UbaC1152DamP (100% identity) | GATC | M.EcoZ1814DamP |
| 2300 | ribulose-phosphate 3-epimerase | |||
| 2805 | DUF2556 family protein | |||
| 2810 | M | M.EcosPA8ORF11510P (100% identity) | ATGCAT | M.EcoZ1814ORF2810P |
| 2815 | DNA-binding transcriptional regulator Fis | |||
| 7680 | recombination protein NinB | |||
| 7685 | M | M.SflWW1ORF7070P (100% identity) | GATC | M.EcoZ1814ORF7685P |
| 7690 | NinE family protein | |||
| 10125 | recombination protein NinB | |||
| 10130 | M | M.Eph2851ORFAP (100% identity) | GATC | M.EcoZ1814ORF10130P |
| 10135 | NinE family protein | |||
| 10930 | phosphohydrolase | |||
| 10935 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.EcoZ1814DcmP |
| 10940 | V | V.EcosPA8DcmP (100% identity) | V.EcoZ1814DcmP | |
| 10945 | drug/metabolite exporter YedA | |||
| 13145 | TrmB family transcriptional regulator | |||
| 13150 | M | M.EcosPA8ORF27255P (100% identity) | M.EcoZ1814ORF13150P | |
| 13165 | DUF1737 domain-containing protein | |||
| 13760 | epoxyqueuosine reductase QueH | |||
| 13765 | M | M.EcoZ910ORF13770P (100% identity) | GCCGGC | M.EcoZ1814ORF13765P |
| 13770 | R | EcoZ910ORF13770P (100% identity) | GCCGGC | EcoZ1814ORF13765P |
| 13775 | 90 aa hypothetical protein | |||
| 13795 | TrmB family transcriptional regulator | |||
| 13800 | M | M.EcoZ910ORF13805P (100% identity) | M.EcoZ1814ORF13800P | |
| 13805 | DUF1737 domain-containing protein | |||
| 24440 | RM | EcosPA8ORF17390P (100% identity) | GAAABCC | EcoZ1814ORF24440P |
| 24445 | DEAD/DEAH box helicase | |||
| 24475 | N-acetylneuraminic acid mutarotase | |||
| 24480 | R | Ecos1613ORF26795P (100% identity) | EcoZ1814ORF24480P | |
| 24485 | transposase | |||
| plasmid pZ1814-1 | ||||
| 27650 | 101 aa hypothetical protein | |||
| 27655 | M | M.EcosPA8ORF27775P (100% identity) | M.EcoZ1814ORF27655P | |
| 27660 | 73 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 24210 | endoribonuclease SymE | |||
| 24215 | R | EcosPA8GmrSDP (55% identity) | EcoZ1814GmrDP | |
| 24220 | R | Ecos1613GmrSP (100% identity) | EcoZ1814GmrSP | |
| 24225 | DUF1127 domain-containing protein | |||