Escherichia coli O157:H7 Z1816 |
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Putative Escherichia coli O157:H7 Z1816 RM systems
Ref: Fitzgerald,S. et al. unpublished
REBASE ref # 31844
| Sequence length: | GenBank #: | |
| Chromosome: | 5,558,429 bp | CP062719 |
| plasmid pZ1816-1: | 92,734 bp | CP062720 |
REBASE acronym: EcoZ1816
Org_num: 46713
All begin ILQ55_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 24460 | DUF262 domain-containing protein | |||
| 24465 | R | Ecos1613ORF27060P (100% identity) | CACNNNNNNNCTGG | EcoZ1816ORF24470P |
| 24470 | M | M.EcosPA8ORF17615P (100% identity) | CACNNNNNNNCTGG | M.EcoZ1816ORF24470P |
| 24475 | S | S.EcosPA8ORF17615P (100% identity) | CACNNNNNNNCTGG | S.EcoZ1816ORF24470P |
| 24480 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2290 | cell division protein DamX | |||
| 2295 | M | M.UbaC1152DamP (100% identity) | GATC | M.EcoZ1816DamP |
| 2300 | ribulose-phosphate 3-epimerase | |||
| 2805 | DUF2556 family protein | |||
| 2810 | M | M.EcosPA8ORF11510P (100% identity) | ATGCAT | M.EcoZ1816ORF2810P |
| 2815 | DNA-binding transcriptional regulator Fis | |||
| 7675 | recombination protein NinB | |||
| 7680 | M | M.SflWW1ORF7070P (100% identity) | GATC | M.EcoZ1816ORF7680P |
| 7685 | NinE family protein | |||
| 10120 | recombination protein NinB | |||
| 10125 | M | M.Eph2851ORFAP (100% identity) | GATC | M.EcoZ1816ORF10125P |
| 10130 | NinE family protein | |||
| 10925 | phosphohydrolase | |||
| 10930 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.EcoZ1816DcmP |
| 10935 | V | V.EcosPA8DcmP (100% identity) | V.EcoZ1816DcmP | |
| 10940 | drug/metabolite exporter YedA | |||
| 14835 | DUF1737 domain-containing protein | |||
| 14840 | M | M.EcoZ910ORF13805P (100% identity) | M.EcoZ1816ORF14840P | |
| 14845 | TrmB family transcriptional regulator | |||
| 14865 | 90 aa hypothetical protein | |||
| 14870 | R | EcoZ910ORF13770P (100% identity) | GCCGGC | EcoZ1816ORF14875P |
| 14875 | M | M.EcoZ910ORF13770P (100% identity) | GCCGGC | M.EcoZ1816ORF14875P |
| 14880 | epoxyqueuosine reductase QueH | |||
| 15550 | DUF1737 domain-containing protein | |||
| 15565 | M | M.EcosPA8ORF27255P (100% identity) | M.EcoZ1816ORF15565P | |
| 15570 | TrmB family transcriptional regulator | |||
| 24710 | RM | EcosPA8ORF17390P (100% identity) | GAAABCC | EcoZ1816ORF24710P |
| 24715 | DEAD/DEAH box helicase | |||
| 24745 | N-acetylneuraminic acid mutarotase | |||
| 24750 | R | Ecos1613ORF26795P (100% identity) | EcoZ1816ORF24750P | |
| 24755 | transposase | |||
| plasmid pZ1816-1 | ||||
| 27920 | 101 aa hypothetical protein | |||
| 27925 | M | M.EcosPA8ORF27775P (100% identity) | M.EcoZ1816ORF27925P | |
| 27930 | 73 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 24480 | endoribonuclease SymE | |||
| 24485 | R | EcosPA8GmrSDP (55% identity) | EcoZ1816GmrDP | |
| 24490 | R | Ecos1613GmrSP (100% identity) | EcoZ1816GmrSP | |
| 24495 | DUF1127 domain-containing protein | |||