Escherichia coli O157:H7 Z1825 |
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Putative Escherichia coli O157:H7 Z1825 RM systems
Ref: Fitzgerald,S. et al. unpublished
REBASE ref # 31844
| Sequence length: | GenBank #: | |
| Chromosome: | 5,544,976 bp | CP062717 |
| plasmid pZ1825-1: | 96,507 bp | CP062718 |
REBASE acronym: EcoZ1825
Org_num: 46714
All begin ILQ56_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 24380 | DUF262 domain-containing protein | |||
| 24385 | R | Ecos1613ORF27060P (100% identity) | CACNNNNNNNCTGG | EcoZ1825ORF24390P |
| 24390 | M | M.EcosPA8ORF17615P (100% identity) | CACNNNNNNNCTGG | M.EcoZ1825ORF24390P |
| 24395 | S | S.EcosPA8ORF17615P (100% identity) | CACNNNNNNNCTGG | S.EcoZ1825ORF24390P |
| 24400 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2290 | cell division protein DamX | |||
| 2295 | M | M.UbaC1152DamP (100% identity) | GATC | M.EcoZ1825DamP |
| 2300 | ribulose-phosphate 3-epimerase | |||
| 2805 | DUF2556 family protein | |||
| 2810 | M | M.EcosPA8ORF11510P (100% identity) | ATGCAT | M.EcoZ1825ORF2810P |
| 2815 | DNA-binding transcriptional regulator Fis | |||
| 7660 | recombination protein NinB | |||
| 7665 | M | M.SflWW1ORF7070P (100% identity) | GATC | M.EcoZ1825ORF7665P |
| 7670 | NinE family protein | |||
| 10100 | recombination protein NinB | |||
| 10105 | M | M.Eph2851ORFAP (100% identity) | GATC | M.EcoZ1825ORF10105P |
| 10110 | NinE family protein | |||
| 10905 | phosphohydrolase | |||
| 10910 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.EcoZ1825DcmP |
| 10915 | V | V.EcosPA8DcmP (100% identity) | V.EcoZ1825DcmP | |
| 10920 | drug/metabolite exporter YedA | |||
| 13120 | TrmB family transcriptional regulator | |||
| 13125 | M | M.EcosPA8ORF27255P (100% identity) | M.EcoZ1825ORF13125P | |
| 13140 | DUF1737 domain-containing protein | |||
| 13735 | epoxyqueuosine reductase QueH | |||
| 13740 | M | M.EcoZ910ORF13770P (100% identity) | GCCGGC | M.EcoZ1825ORF13740P |
| 13745 | R | EcoZ910ORF13770P (100% identity) | GCCGGC | EcoZ1825ORF13740P |
| 13750 | 90 aa hypothetical protein | |||
| 13770 | TrmB family transcriptional regulator | |||
| 13775 | M | M.EcoZ910ORF13805P (100% identity) | M.EcoZ1825ORF13775P | |
| 13780 | DUF1737 domain-containing protein | |||
| 24630 | RM | EcosPA8ORF17390P (100% identity) | GAAABCC | EcoZ1825ORF24630P |
| 24635 | DEAD/DEAH box helicase | |||
| 24665 | N-acetylneuraminic acid mutarotase | |||
| 24670 | R | Ecos1613ORF26795P (100% identity) | EcoZ1825ORF24670P | |
| 24675 | transposase | |||
| plasmid pZ1825-1 | ||||
| 27850 | 101 aa hypothetical protein | |||
| 27855 | M | M.EcosPA8ORF27775P (100% identity) | M.EcoZ1825ORF27855P | |
| 27860 | 73 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 24400 | endoribonuclease SymE | |||
| 24405 | R | EcosPA8GmrSDP (55% identity) | EcoZ1825GmrDP | |
| 24410 | R | Ecos1613GmrSP (100% identity) | EcoZ1825GmrSP | |
| 24415 | DUF1127 domain-containing protein | |||