Escherichia coli O157:H7 Z1834 |
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Putative Escherichia coli O157:H7 Z1834 RM systems
Ref: Fitzgerald,S. et al. unpublished
REBASE ref # 31844
| Sequence length: | GenBank #: | |
| Chromosome: | 5,483,624 bp | CP062702 |
| plasmid pZ1834-1: | 95,141 bp | CP062703 |
REBASE acronym: EcoZ1834
Org_num: 46720
All begin ILQ62_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 18385 | 58 aa hypothetical protein | |||
| 18390 | M | M.Ecos1613ORF5225P (100% identity) | CCAYNNNNNGTTY | M.EcoZ1834ORF18390P |
| 18395 | S | S.Ecos1613ORF5225P (100% identity) | CCAYNNNNNGTTY | S.EcoZ1834ORF18390P |
| 18400 | DUF4433 domain-containing protein | |||
| 18405 | macro domain-containing protein | |||
| 18410 | R | Ecos1613ORF5225P (100% identity) | CCAYNNNNNGTTY | EcoZ1834ORF18390P |
| 18415 | M48 family metallopeptidase | |||
| 23645 | DUF262 domain-containing protein | |||
| 23650 | R | Ecos1613ORF27060P (100% identity) | CACNNNNNNNCTGG | EcoZ1834ORF23655P |
| 23655 | M | M.EcosPA8ORF17615P (100% identity) | CACNNNNNNNCTGG | M.EcoZ1834ORF23655P |
| 23660 | S | S.Ecos1613ORF27060P (100% identity) | CACNNNNNNNCTGG | S.EcoZ1834ORF23655P |
| 23665 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2270 | cell division protein DamX | |||
| 2275 | M | M.UbaC1152DamP (100% identity) | GATC | M.EcoZ1834DamP |
| 2280 | ribulose-phosphate 3-epimerase | |||
| 2785 | DUF2556 family protein | |||
| 2790 | M | M.EcosPA8ORF11510P (100% identity) | ATGCAT | M.EcoZ1834ORF2790P |
| 2795 | DNA-binding transcriptional regulator Fis | |||
| 10695 | phosphohydrolase | |||
| 10700 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.EcoZ1834DcmP |
| 10705 | V | V.EcosPA8DcmP (100% identity) | V.EcoZ1834DcmP | |
| 10710 | drug/metabolite exporter YedA | |||
| 14965 | DUF1737 domain-containing protein | |||
| 14980 | M | M.EcosPA8ORF27255P (100% identity) | M.EcoZ1834ORF14980P | |
| 14985 | TrmB family transcriptional regulator | |||
| 23880 | RM | EcosPA8ORF17390P (100% identity) | GAAABCC | EcoZ1834ORF23880P |
| 23885 | DEAD/DEAH box helicase | |||
| 23915 | N-acetylneuraminic acid mutarotase | |||
| 23920 | R | Ecos1613ORF26795P (100% identity) | EcoZ1834ORF23920P | |
| 23925 | transposase | |||
| plasmid pZ1834-1 | ||||
| 27305 | 101 aa hypothetical protein | |||
| 27310 | M | M.EcosPA8ORF27775P (100% identity) | M.EcoZ1834ORF27310P | |
| 27315 | 73 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 23665 | endoribonuclease SymE | |||
| 23670 | R | EcosPA8GmrSDP (55% identity) | EcoZ1834GmrDP | |
| 23675 | R | Ecos1613GmrSP (100% identity) | EcoZ1834GmrSP | |
| 23680 | DUF1127 domain-containing protein | |||