Escherichia coli SP15 |
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Putative Escherichia coli SP15 RM systems
Ref: Frederic,A. et al. unpublished
REBASE ref # 31823
| Sequence length: | GenBank #: | |
| Chromosome: | 5,073,631 bp | AP024131 |
| plasmid SP15_P2: | 111,583 bp | AP024133 |
REBASE acronym: EcoSP15
Org_num: 46801
All begin EcSP15_, EcSP15_n
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3884 | toxic peptide regulated by antisense sRNA symR | |||
| 3885 | S | S.EcosS1ORF16790P (100% identity) | CCANNNNNNNCTTC | S.EcoSP15ORF3886P |
| 3886 | M | M.Ecoppa1ORF6185P (100% identity) | CCANNNNNNNCTTC | M.EcoSP15ORF3886P |
| 3887 | R | EcosS1ORF16790P (100% identity) | CCANNNNNNNCTTC | EcoSP15ORF3886P |
| 3888 | methylated adenine and cytosine restriction | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 499 | 65 aa hypothetical protein | |||
| 500 | M | M.SboBSORF1444P (100% identity) | A | M.EcoSP15ORF500P |
| 504 | 75 aa hypothetical protein | |||
| 1125 | amino acid exporter for phenylalanine | |||
| 1126 | V | V.SflC32DcmP (74% identity) | V.EcoSP15DcmP | |
| 1127 | M | M.EcoXMDcmP (100% identity) | CCWGG | M.EcoSP15DcmP |
| 1128 | HD superfamily phosphohydrolase | |||
| 1856 | 83 aa hypothetical protein | |||
| 1857 | M | M.EcoSP13ORF23385P (100% identity) | M.EcoSP15ORF1857P | |
| 1858 | 64 aa hypothetical protein | |||
| 2018 | repressor | |||
| 2019 | M | M.EcoY26ORF4515P (100% identity) | GATC | M.EcoSP15ORF2019P |
| 2020 | 162 aa hypothetical protein | |||
| 2675 | global DNA-binding transcriptional dual | |||
| 2676 | M | M.PmeBin470ORFAP (100% identity) | ATGCAT | M.EcoSP15ORF2676P |
| 2677 | 59 aa hypothetical protein | |||
| 2796 | D-ribulose-5-phosphate 3-epimerase | |||
| 2797 | M | M.SspPIBDamP (100% identity) | GATC | M.EcoSP15DamP |
| 2798 | cell division protein DamX | |||
| 3531 | 158 aa hypothetical protein | |||
| 3532 | M | M.Sso90ORF15820P (100% identity) | GATC | M.EcoSP15ORF3532P |
| 3533 | repressor | |||
| 3835 | 319 aa hypothetical protein | |||
| 3836 | R | Ecoi127aORF4076P (100% identity) | EcoSP15ORF3836P | |
| 3837 | 9-O-acetyl-N-acetylneuraminic acid deacetylase | |||
| 4490 | 64 aa hypothetical protein | |||
| 4491 | M | M.EcosE1ORFAP (100% identity) | M.EcoSP15ORF4491P | |
| 4492 | 64 aa hypothetical protein | |||
| plasmid SP15_P2 | ||||
| 5126 | 76 aa hypothetical protein | |||
| 5127 | M | M.Eco4991ORFLP (100% identity) | M.EcoSP15ORF5127P | |
| 5128 | 269 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1978 | 257 aa hypothetical protein | |||
| 1979 | R | EspFAAGmrSDP (100% identity) | EcoSP15GmrSD2P | |
| 1980 | DNA-invertase | |||
| 3882 | 306 aa hypothetical protein | |||
| 3883 | R | EcoPMV1GmrSD2P (100% identity) | EcoSP15GmrSDP | |
| 3884 | toxic peptide regulated by antisense sRNA symR | |||
| 3887 | endonuclease R Type I restriction enzyme | |||
| 3888 | R | EcosS1MrrP (100% identity) | EcoSP15MrrP | |
| 3889 | GTP-binding protein | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 334 | recombination protein | |||
| 335 | M | M.EcosC25ORF16305P (100% identity) | GATC | M.EcoSP15ORF335P |
| 336 | 113 aa hypothetical protein | |||