Escherichia coli RCAD0514 |
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Putative Escherichia coli RCAD0514 RM systems
Ref: Mao,C. et al. unpublished
REBASE ref # 31853
| Sequence length: | GenBank #: | |
| Chromosome: | 4,679,465 bp | CP034106 |
| plasmid pRCAD0514EC-1: | 123,510 bp | CP034107 |
| plasmid pRCAD0514EC-2: | 87,297 bp | CP034108 |
REBASE acronym: Eco514
Org_num: 46752
All begin EGA47_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 5545 | 394 aa hypothetical protein | |||
| 5550 | R | SflFF64ORF3630P (100% identity) | Eco514ORF5560P | |
| 5555 | S | S.SflFF64ORF3630P (100% identity) | S.Eco514ORF5560P | |
| 5560 | M | M.SflFF64ORF3630P (100% identity) | M.Eco514ORF5560P | |
| 5565 | DUF262 domain-containing protein | |||
| 7335 | GTPase family protein | |||
| 7340 | M | M.Kpnb12LORF3425P (100% identity) | M.Eco514ORF7340P | |
| 7345 | S | S.Kpnb12LORF3425P (100% identity) | S.Eco514ORF7340P | |
| 7350 | R | EcoIMP163ORFBP (58% identity) | Eco514ORF7340AP | |
| 7355 | IS5-like element ISKpn26 family transposase | |||
| 7360 | R | EcoCP131ORF13925P (41% identity) | Eco514ORF7340BP | |
| 7365 | transposase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3530 | cell division protein DamX | |||
| 3535 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco514DamP |
| 3540 | ribulose-phosphate 3-epimerase | |||
| 4175 | DUF2556 domain-containing protein | |||
| 4180 | M | M.SspS13ORF21055P (100% identity) | ATGCAT | M.Eco514ORF4180P |
| 4185 | DNA-binding transcriptional regulator Fis | |||
| 10170 | 252 aa hypothetical protein | |||
| 10175 | R | EcoYSP81ORFBP (100% identity) | RCSRC | Eco514ORF10175P |
| 10180 | transcription factor | |||
| 11290 | phosphohydrolase | |||
| 11295 | M | M.SflSTLE1DcmP (99% identity) | CCWGG | M.Eco514DcmP |
| 11300 | V | V.SsoSE61DcmP (100% identity) | V.Eco514DcmP | |
| 11305 | EamA family transporter | |||
| 21890 | 106 aa hypothetical protein | |||
| 21895 | R | SflFF64ORF19855P (100% identity) | GAAC | Eco514ORF21895P |
| 21900 | DUF4102 domain-containing protein | |||
| plasmid pRCAD0514EC-2 | ||||
| 23890 | 73 aa hypothetical protein | |||
| 23895 | M | M.Xca80ORFEP (100% identity) | M.Eco514ORF23895P | |
| 23900 | 59 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| plasmid pRCAD0514EC-1 | ||||
| 23000 | mobilization protein MobX | |||
| 23005 | R | SspS13ORF650P (95% identity) | Eco514ORF23015P | |
| 23010 | IS3-like element IS3 family transposase | |||
| 23015 | M | M.SspS13ORF650P (34% identity) | M.Eco514ORF23015BP | |
| 23020 | IS1 family transposase | |||
| 23025 | M | M.SspS13ORF650P (63% identity) | M.Eco514ORF23015AP | |
| 23030 | 67 aa hypothetical protein | |||