Escherichia coli O1:HNT DR162-CEF |
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Putative Escherichia coli O1:HNT DR162-CEF RM systems
Ref: Tarabai,H. et al. unpublished
REBASE ref # 31846
Complete sequence: 5,161,290 bp
GenBank #: CP071050
REBASE acronym: EcoCEF
Org_num: 46735
All begin JX271_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 20095 | AAA family ATPase | |||
| 20100 | S | S.EcosEC2ORF410P (100% identity) | S.EcoCEFORF20105P | |
| 20105 | M | M.EcoMB57ORF19930P (100% identity) | M.EcoCEFORF20105P | |
| 20110 | R | EcoMB57ORF19930P (100% identity) | EcoCEFORF20105P | |
| 20115 | transposase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1005 | 68 aa hypothetical protein | |||
| 1010 | M | M.EcosE2ORF21575P (100% identity) | M.EcoCEFORF1010P | |
| 1015 | 341 aa hypothetical protein | |||
| 3590 | 332 aa hypothetical protein | |||
| 3595 | R | EcoXDLORF21295P (100% identity) | EcoCEFORF3595P | |
| 3600 | HNH endonuclease | |||
| 3645 | DEAD/DEAH box helicase | |||
| 3650 | RM | EcoXDLORF21245P (99% identity) | EcoCEFORF3650P | |
| 10475 | phosphohydrolase | |||
| 10480 | M | M.SflWW1DcmP (100% identity) | CCWGG | M.EcoCEFDcmP |
| 10485 | V | V.SsoSE61DcmP (100% identity) | V.EcoCEFDcmP | |
| 10490 | drug/metabolite exporter YedA | |||
| 21945 | DNA-binding transcriptional regulator Fis | |||
| 21950 | M | M.Ecost20ORFAP (100% identity) | ATGCAT | M.EcoCEFORF21950P |
| 21955 | DUF2556 family protein | |||
| 22475 | ribulose-phosphate 3-epimerase | |||
| 22480 | M | M.SspPIBDamP (100% identity) | GATC | M.EcoCEFDamP |
| 22485 | cell division protein DamX | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3920 | DUF1127 domain-containing protein | |||
| 3925 | R | EcoSBF22GmrSDP (100% identity) | EcoCEFGmrSDP | |
| 3930 | endoribonuclease SymE | |||