Escherichia coli 30COLEC |
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Putative Escherichia coli 30COLEC RM systems
Ref: Ding,Y. et al. bioRxiv (2021)
REBASE ref # 31807
Complete sequence: 4,668,053 bp
GenBank #: CP070930
REBASE acronym: EcoLEC
Org_num: 46508
All begin JR883_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 9135 | IS5-like element ISKpn26 family transposase | |||
| 9140 | M | M.EcoG49ORF8820P (36% identity) | M.EcoLECORF9140P | |
| 9145 | S | S.EcoH227ORFDP (99% identity) | S.EcoLECORF9140P | |
| 9150 | YecA family protein | |||
| 9155 | R | EcoZYB62ORF9405P (99% identity) | EcoLECORF9140P | |
| 9160 | M48 family metallopeptidase | |||
| 19105 | DUF262 domain-containing protein | |||
| 19110 | R | Sbo9733IP (100% identity) | EcoLECORF19115P | |
| 19115 | M | M.EcoLD391ORF19875P (100% identity) | M.EcoLECORF19115P | |
| 19120 | S | S.EcoLD391ORF19875P (100% identity) | S.EcoLECORF19115P | |
| 19125 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1650 | cell division protein DamX | |||
| 1655 | M | M.UbaC1152DamP (100% identity) | GATC | M.EcoLECDamP |
| 1660 | ribulose-phosphate 3-epimerase | |||
| 2275 | DUF2556 family protein | |||
| 2280 | M | M.Ssp28760ORF20045P (100% identity) | ATGCAT | M.EcoLECORF2280P |
| 2285 | DNA-binding transcriptional regulator Fis | |||
| 8850 | phosphohydrolase | |||
| 8855 | M | M.SflN107DcmP (99% identity) | CCWGG | M.EcoLECDcmP |
| 8860 | V | V.SsoSE61DcmP (100% identity) | V.EcoLECDcmP | |
| 8865 | drug/metabolite exporter YedA | |||
| 10910 | DUF977 family protein | |||
| ??? | M | M.SsoSE61ORF20220P (100% identity) | M.EcoLECORF10915P | |
| 10920 | 95 aa hypothetical protein | |||
| 17260 | phage holin, lambda family | |||
| 17265 | M | M.EcoLD391ORF17860P (100% identity) | M.EcoLECORF17265P | |
| 17270 | TrmB family transcriptional regulator | |||
| 20005 | BREX system P-loop protein BrxC | |||
| 20010 | RM | EcoHZ13ORF3930P (100% identity) | EcoLECORF20010P | |
| 20015 | BREX-1 system phosphatase PglZ type A | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 8695 | shufflon system plasmid conjugative transfer | |||
| 8700 | R | SenMAC15ORF10230P (100% identity) | EcoLECORF8705P | |
| 8705 | M | M.SenSA606ORF9550P (100% identity) | M.EcoLECORF8705P | |
| 8710 | integrase arm-type DNA-binding domain-containing | |||