Escherichia coli 99COLEC |
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Putative Escherichia coli 99COLEC RM systems
Ref: Ding,Y. et al. bioRxiv (2021)
REBASE ref # 31807
| Sequence length: | GenBank #: | |
| Chromosome: | 4,770,142 bp | CP070902 |
| plasmid p99COLEC-1: | 173,696 bp | CP070903 |
REBASE acronym: Eco99C
Org_num: 46519
All begin JR895_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 5565 | ankyrin repeat domain-containing protein | |||
| 5570 | R | EcoXJ62ORF5350P (100% identity) | Eco99CORF5580P | |
| 5575 | S | S.Eco9104I (61% identity) | S.Eco99CORF5580P | |
| ??? | M | M.Eco730V1ORF6085P (100% identity) | M.Eco99CORF5580P | |
| 5585 | transposase | |||
| 9270 | 388 aa hypothetical protein | |||
| 9275 | M | M.EcoR10I (100% identity) | M.Eco99CORF9275P | |
| 9280 | S | S.Eco0204ORF9505P (63% identity) | S.Eco99CORF9275P | |
| 9285 | YecA family protein | |||
| 9290 | cold shock domain-containing protein | |||
| 9295 | R | Eco1851ORF17725P (99% identity) | Eco99CORF9275P | |
| 9300 | M48 family metallopeptidase | |||
| 19595 | 322 aa hypothetical protein | |||
| 19600 | R | Sbo9733IP (100% identity) | Eco99CORF19605P | |
| 19605 | M | M.Eco203CCORF37060P (100% identity) | M.Eco99CORF19605P | |
| 19610 | S | S.Eco203CCORF37060P (100% identity) | S.Eco99CORF19605P | |
| 19615 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1740 | cell division protein DamX | |||
| 1745 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco99CDamP |
| 1750 | ribulose-phosphate 3-epimerase | |||
| 2365 | DUF2556 family protein | |||
| 2370 | M | M.Ssp28760ORF20045P (100% identity) | ATGCAT | M.Eco99CORF2370P |
| 2375 | DNA-binding transcriptional regulator Fis | |||
| 8910 | phosphohydrolase | |||
| 8915 | M | M.SsoSE61DcmP (100% identity) | CCWGG | M.Eco99CDcmP |
| 8920 | V | V.SsoSE61DcmP (100% identity) | V.Eco99CDcmP | |
| 8925 | drug/metabolite exporter YedA | |||
| plasmid p99COLEC-1 | ||||
| 23375 | 56 aa hypothetical protein | |||
| ??? | M | M.Eco6EVAORFBP (97% identity) | M.Eco99CORF23380P | |
| 23385 | thermonuclease family protein | |||
| 23560 | DNA-binding protein | |||
| 23565 | M | M.Sens770ORF22135P (100% identity) | M.Eco99CORF23565P | |
| 23570 | 273 aa hypothetical protein | |||