Escherichia coli EH01-18-02 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Escherichia coli EH01-18-02 RM systems
Ref: Moser,A.I. et al. unpublished
REBASE ref # 31808
| Sequence length: | GenBank #: | |
| Chromosome: | 4,805,989 bp | CP063518 |
| plasmid pEH01-18-02_1: | 39,385 bp | CP063519 |
REBASE acronym: Eco1802
Org_num: 46561
All begin IQS16_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2425 | endoribonuclease SymE | |||
| 2430 | S | S.SflN101ORF11675P (100% identity) | CCANNNNNNNNNTTGG | S.Eco1802ORF2435P |
| 2435 | M | M.SspS13ORF3945P (100% identity) | CCANNNNNNNNNTTGG | M.Eco1802ORF2435P |
| 2440 | R | SflN101ORF11675P (100% identity) | CCANNNNNNNNNTTGG | Eco1802ORF2435P |
| 2445 | 322 aa hypothetical protein | |||
| 18940 | transposase | |||
| 18945 | R | SenSI167ORF3215P (100% identity) | Eco1802ORF18960P | |
| 18950 | DUF4268 domain-containing protein | |||
| 18955 | S | S.SenSI167ORF3215P (100% identity) | S.Eco1802ORF18960P | |
| 18960 | M | M.SenSI167ORF3215P (100% identity) | M.Eco1802ORF18960P | |
| 18965 | IS3 family transposase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 325 | RNA-binding protein | |||
| 330 | M | M.SflFF35ORF20P (100% identity) | M.Eco1802ORF330P | |
| 335 | 330 aa hypothetical protein | |||
| 2230 | AAA family ATPase | |||
| 2235 | R | SflN101ORF11875P (100% identity) | Eco1802ORF2235P | |
| 2240 | HNH endonuclease | |||
| 13185 | drug/metabolite exporter YedA | |||
| 13190 | V | V.EcoTH9F11DcmP (100% identity) | V.Eco1802DcmP | |
| 13195 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.Eco1802DcmP |
| 13200 | phosphohydrolase | |||
| 20060 | DNA-binding transcriptional regulator Fis | |||
| 20065 | M | M.SspS13ORF21055P (100% identity) | ATGCAT | M.Eco1802ORF20065P |
| 20070 | DUF2556 family protein | |||
| 20590 | ribulose-phosphate 3-epimerase | |||
| 20595 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco1802DamP |
| 20600 | cell division protein DamX | |||
| plasmid pEH01-18-02_1 | ||||
| 23085 | 101 aa hypothetical protein | |||
| 23090 | M | M.EcoT34ORF24760P (100% identity) | M.Eco1802ORF23090P | |
| 23095 | 73 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2220 | 128 aa hypothetical protein | |||
| 2225 | R | SflN101McrCP (100% identity) | Eco1802McrCP | |
| 2230 | R | SflN101McrBP (100% identity) | Eco1802McrBP | |
| 2235 | HNH endonuclease | |||
| 2410 | DUF1127 domain-containing protein | |||
| 2415 | R | SflLIN8GmrSDP (42% identity) | Eco1802GmrSP | |
| 2420 | R | Ecos673GmrDP (100% identity) | Eco1802GmrDP | |
| 2425 | endoribonuclease SymE | |||