Escherichia coli EH01-18-04-A |
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Putative Escherichia coli EH01-18-04-A RM systems
Ref: Moser,A.I. et al. unpublished
REBASE ref # 31808
| Sequence length: | GenBank #: | |
| Chromosome: | 5,048,315 bp | CP063515 |
| plasmid pEH01-18-04-A_1: | 149,434 bp | CP063516 |
| plasmid pEH01-18-04-A_2: | 69,098 bp | CP063517 |
REBASE acronym: Eco1804A
Org_num: 46562
All begin IQS17_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 19965 | ash family protein | |||
| 19970 | S | S.EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | S.Eco1804AORF19975P |
| 19975 | M | M.EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | M.Eco1804AORF19975P |
| 19980 | R | EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | Eco1804AORF19975P |
| 19985 | type IV toxin-antitoxin system AbiEi family | |||
| plasmid pEH01-18-04-A_1 | ||||
| 25125 | type II toxin-antitoxin system Phd/YefM family | |||
| 25130 | M | M.SenceORFJP (99% identity) | CAAYNNNNNNCTGG | M.Eco1804AORF25130P |
| 25135 | S | S.SenceORFJP (100% identity) | CAAYNNNNNNCTGG | S.Eco1804AORF25130P |
| 25140 | R | KpnKPH1ORF27575P (100% identity) | CAAYNNNNNNCTGG | Eco1804AORF25130P |
| 25145 | IS1 family transposase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3825 | class II holin family protein | |||
| 3845 | M | M.SflJ17BORF23540P (100% identity) | A | M.Eco1804AORF3845P |
| 3850 | TrmB family transcriptional regulator | |||
| 4415 | drug/metabolite exporter YedA | |||
| 4420 | V | V.SflC32DcmP (74% identity) | V.Eco1804ADcmP | |
| 4425 | M | M.SflC32DcmP (100% identity) | CCWGG | M.Eco1804ADcmP |
| 4430 | phosphohydrolase | |||
| 7725 | 73 aa hypothetical protein | |||
| 7730 | M | M.Ssp14523ORF22990P (100% identity) | M.Eco1804AORF7730P | |
| 7735 | 103 aa hypothetical protein | |||
| 12005 | DNA-binding transcriptional regulator Fis | |||
| 12010 | M | M.PmeBin470ORFAP (100% identity) | ATGCAT | M.Eco1804AORF12010P |
| 12015 | DUF2556 family protein | |||
| 12605 | ribulose-phosphate 3-epimerase | |||
| 12610 | M | M.SspPIBDamP (100% identity) | GATC | M.Eco1804ADamP |
| 12615 | cell division protein DamX | |||
| 16260 | PerC family transcriptional regulator | |||
| 16265 | M | M.Sso90ORF15820P (100% identity) | GATC | M.Eco1804AORF16265P |
| 16270 | LexA family transcriptional regulator | |||
| 16300 | 67 aa hypothetical protein | |||
| 16305 | M | M.EcoSP5ORF17940P (100% identity) | M.Eco1804AORF16305P | |
| 16310 | phage lysis protein EssD | |||
| 17760 | 97 aa hypothetical protein | |||
| 17765 | R | Ecos19ORF20635P (100% identity) | Eco1804AORF17765P | |
| 17770 | 607 aa hypothetical protein | |||
| 17775 | ATP-binding protein | |||
| 17780 | M | M.Sen5773ORF4471P (100% identity) | RCCGGY | M.Eco1804AORF17780P |
| 17785 | 174 aa hypothetical protein | |||
| 18040 | helix-turn-helix domain-containing protein | |||
| 18045 | M | M2.EcosEC4ORF20110P (100% identity) | GGTCTC | M1.Eco1804AORF18045P |
| 18050 | M | M2.EcosS9ORF2810P (100% identity) | GGTCTC | M2.Eco1804AORF18045P |
| 18055 | R | EcosS9ORF2810P (100% identity) | GGTCTC | Eco1804AORF18045P |
| 18060 | McrC family protein | |||
| plasmid pEH01-18-04-A_1 | ||||
| 25195 | 102 aa hypothetical protein | |||
| 25200 | M | M.UbapRSB107ORFAP (100% identity) | SAY | M.Eco1804AORF25200P |
| 25205 | 73 aa hypothetical protein | |||
| plasmid pEH01-18-04-A_2 | ||||
| 25640 | 97 aa hypothetical protein | |||
| 25645 | M | M.Xca80ORFEP (100% identity) | M.Eco1804AORF25645P | |
| 25650 | 73 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 18055 | Alw26I/Eco31I/Esp3I family type II restriction | |||
| 18060 | R | EcosS9McrCP (100% identity) | Eco1804AMcrCP | |
| 18065 | R | EcosS3McrBP (100% identity) | Eco1804AMcrBP | |
| 18070 | glycosyltransferase family 2 protein | |||