Escherichia coli EM18-18-42 |
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Putative Escherichia coli EM18-18-42 RM systems
Ref: Moser,A.I. et al. unpublished
REBASE ref # 31808
| Sequence length: | GenBank #: | |
| Chromosome: | 4,721,128 bp | CP063473 |
| plasmid pEM18-18-42_1: | 210,342 bp | CP063474 |
REBASE acronym: Eco1842
Org_num: 46569
All begin IQS24_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2535 | endoribonuclease SymE | |||
| 2540 | S | S.Psp228ORFCP (69% identity) | S.Eco1842ORF2545P | |
| 2545 | M | M.SspS13ORF3945P (100% identity) | M.Eco1842ORF2545P | |
| 2550 | R | EcosLF82ORF3455P (100% identity) | Eco1842ORF2545P | |
| 2555 | 322 aa hypothetical protein | |||
| 10940 | helix-turn-helix transcriptional regulator | |||
| 10945 | M | M.Eco34C12ORF11440P (100% identity) | M.Eco1842ORF10945P | |
| 10950 | S | S.Eco34C12ORF11440P (99% identity) | S.Eco1842ORF10945P | |
| 10955 | YecA family protein | |||
| 10960 | R | KquPF42ORF12975P (100% identity) | Eco1842ORF10945P | |
| 10965 | M48 family metallopeptidase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2375 | 332 aa hypothetical protein | |||
| 2380 | R | EcoFT130ORF19795P (100% identity) | Eco1842ORF2380P | |
| 2385 | HNH endonuclease | |||
| 5625 | recombination protein NinB | |||
| 5630 | M | M.SflWW1ORF7070P (98% identity) | GATC | M.Eco1842ORF5630P |
| 5635 | NinE family protein | |||
| 7050 | recombination protein NinB | |||
| 7055 | M | M.SflWW1ORF7070P (100% identity) | GATC | M.Eco1842ORF7055P |
| 7060 | NinE family protein | |||
| 9505 | DUF4060 family protein | |||
| ??? | M | M.Eco88CORF12765P (100% identity) | M.Eco1842ORF9510P | |
| 9515 | DUF1317 family protein | |||
| 9695 | 134 aa hypothetical protein | |||
| 9700 | M | M.Eco199ORF14150P (99% identity) | M.Eco1842ORF9700P | |
| 9705 | 100 aa hypothetical protein | |||
| 13250 | drug/metabolite exporter YedA | |||
| 13255 | V | V.SsoSE61DcmP (100% identity) | V.Eco1842DcmP | |
| 13260 | M | M.SspS13DcmP (100% identity) | CCWGG | M.Eco1842DcmP |
| 13265 | phosphohydrolase | |||
| 19530 | DNA-binding transcriptional regulator Fis | |||
| 19535 | M | M.Ssp28760ORF20045P (100% identity) | ATGCAT | M.Eco1842ORF19535P |
| 19540 | DUF2556 family protein | |||
| 20165 | ribulose-phosphate 3-epimerase | |||
| 20170 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco1842DamP |
| 20175 | cell division protein DamX | |||
| plasmid pEM18-18-42_1 | ||||
| 22915 | 273 aa hypothetical protein | |||
| 22920 | M | M.Ype21801ORF197P (100% identity) | M.Eco1842ORF22920P | |
| 22925 | DNA-binding protein | |||
| 23560 | thermonuclease family protein | |||
| ??? | M | M.Eco1CORF395P (97% identity) | M.Eco1842ORF23565P | |
| 23570 | 56 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2525 | DUF1127 domain-containing protein | |||
| 2530 | R | EcoRb3GmrSDP (98% identity) | Eco1842GmrSDP | |
| 2535 | endoribonuclease SymE | |||