Escherichia coli FDAARGOS_1301 |
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Putative Escherichia coli FDAARGOS_1301 RM systems
Ref: Sokurenko,E. et al. unpublished
REBASE ref # 31673
| Sequence length: | GenBank #: | |
| Chromosome: | 5,030,370 bp | CP070111 |
| plasmid unnamed1: | 88,686 bp | CP070112 |
| plasmid unnamed2: | 81,012 bp | CP070113 |
REBASE acronym: Eco1301
Org_num: 46633
All begin I6K31_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 12710 | 322 aa hypothetical protein | |||
| 12715 | R | SflC32ORFCP (100% identity) | AAGNNNNNNNRTDCC | Eco1301ORF12720P |
| 12720 | M | M.SspS13ORF3945P (100% identity) | AAGNNNNNNNRTDCC | M.Eco1301ORF12720P |
| 12725 | S | S.SflC32ORFCP (100% identity) | AAGNNNNNNNRTDCC | S.Eco1301ORF12720P |
| 12730 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2755 | phosphohydrolase | |||
| 2760 | M | M.SdySWHE2DcmP (100% identity) | CCWGG | M.Eco1301DcmP |
| 2765 | V | V.EcosEC7DcmP (100% identity) | V.Eco1301DcmP | |
| 2770 | drug/metabolite exporter YedA | |||
| 6015 | DUF1737 domain-containing protein | |||
| 6035 | M | M.EcoY26ORF70P (100% identity) | A | M.Eco1301ORF6035P |
| 6040 | TrmB family transcriptional regulator | |||
| 10920 | 253 aa hypothetical protein | |||
| 10925 | R | Ecos67ORF8885P (100% identity) | Eco1301ORF10930P | |
| 10930 | M | M.Ecos67ORF8885P (100% identity) | M.Eco1301ORF10930P | |
| 10935 | 59 aa hypothetical protein | |||
| 18375 | cell division protein DamX | |||
| 18380 | M | M.SspPIBDamP (100% identity) | GATC | M.Eco1301DamP |
| 18385 | ribulose-phosphate 3-epimerase | |||
| 18975 | DUF2556 family protein | |||
| 18980 | M | M.PmeBin470ORFAP (100% identity) | ATGCAT | M.Eco1301ORF18980P |
| 18985 | DNA-binding transcriptional regulator Fis | |||
| 23105 | DUF1382 family protein | |||
| 23110 | M | M.EcosalpORF20815P (100% identity) | M.Eco1301ORF23110P | |
| 23115 | PerC family transcriptional regulator | |||
| 23370 | DUF1382 family protein | |||
| 23375 | M | M.EcosalpORF20815P (100% identity) | M.Eco1301ORF23375P | |
| 23380 | PerC family transcriptional regulator | |||
| plasmid unnamed1 | ||||
| 24395 | 103 aa hypothetical protein | |||
| 24400 | M | M.SspPIBORF23080P (100% identity) | M.Eco1301ORF24400P | |
| 24405 | 73 aa hypothetical protein | |||
| plasmid unnamed2 | ||||
| 24800 | IS110-like element ISShdy1 family transposase | |||
| 24805 | M | M.Sfl0030ORFCP (100% identity) | SAY | M.Eco1301ORF24805P |
| 24810 | 73 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 12730 | endoribonuclease SymE | |||
| 12735 | R | Eho218GmrDP (100% identity) | Eco1301GmrDP | |
| 12740 | 26 aa hypothetical protein | |||