Escherichia coli FDAARGOS_1287 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Escherichia coli FDAARGOS_1287 RM systems
Ref: Sokurenko,E. et al. unpublished
REBASE ref # 31673
| Sequence length: | GenBank #: | |
| Chromosome: | 5,109,571 bp | CP070071 |
| plasmid unnamed1: | 112,030 bp | CP070070 |
| plasmid unnamed4: | 115,209 bp | CP070074 |
REBASE acronym: Eco1287
Org_num: 46620
All begin I6K17_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 15850 | restriction endonuclease | |||
| ??? | M | M.EcoCT30ORF21785P (100% identity) | GATANNNNNNTAG | M.Eco1287ORF15855P |
| 15860 | S | S.Ecos641ORF3050P (100% identity) | GATANNNNNNTAG | S.Eco1287ORF15855P |
| 15865 | R | Ecos641ORF3050P (100% identity) | GATANNNNNNTAG | Eco1287ORF15855P |
| 15870 | endoribonuclease SymE | |||
| 16275 | DUF600 family protein | |||
| 16280 | R | Ecos641ORF2625P (99% identity) | GGANNNNNNCTTC | Eco1287ORF16285P |
| 16285 | M | M.Ecos641ORF2625P (100% identity) | GGANNNNNNCTTC | M.Eco1287ORF16285P |
| 16290 | S | S.Ecos641ORF2625P (100% identity) | GGANNNNNNCTTC | S.Eco1287ORF16285P |
| 16295 | AAA family ATPase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 980 | TraR/DksA family transcriptional regulator | |||
| 985 | M | M.SenU1590ORF19690P (100% identity) | GATC | M.Eco1287ORF985P |
| 990 | replication endonuclease | |||
| 1285 | LexA family transcriptional regulator | |||
| 1290 | M | M.SflLIN17ORF17440P (100% identity) | GATC | M.Eco1287ORF1290P |
| 1295 | PerC family transcriptional regulator | |||
| 5045 | phosphohydrolase | |||
| 5050 | M | M.SdySWHE2DcmP (100% identity) | CCWGG | M.Eco1287DcmP |
| 5055 | V | V.EcosEC7DcmP (100% identity) | V.Eco1287DcmP | |
| 5060 | drug/metabolite exporter YedA | |||
| 11400 | NinE family protein | |||
| 11405 | M | M.SflWW1ORF7070P (100% identity) | GATC | M.Eco1287ORF11405P |
| 11410 | recombination protein NinB | |||
| 15635 | LexA family transcriptional regulator | |||
| 15640 | M | M.EcoPC1ORF12985P (100% identity) | GATC | M.Eco1287ORF15640P |
| 15645 | PerC family transcriptional regulator | |||
| 16040 | HNH endonuclease | |||
| 16045 | R | SflFF17ORF19275P (100% identity) | Eco1287ORF16045P | |
| 16050 | 59 aa hypothetical protein | |||
| 21450 | cell division protein DamX | |||
| 21455 | M | M.SspPIBDamP (100% identity) | GATC | M.Eco1287DamP |
| 21460 | ribulose-phosphate 3-epimerase | |||
| 22050 | DUF2556 family protein | |||
| 22055 | M | M.EcosS1ORF18905P (100% identity) | ATGCAT | M.Eco1287ORF22055P |
| 22060 | DNA-binding transcriptional regulator Fis | |||
| plasmid unnamed1 | ||||
| 325 | 73 aa hypothetical protein | |||
| 330 | M | M.Sen72779ORF22555P (100% identity) | M.Eco1287ORF330P | |
| 335 | 103 aa hypothetical protein | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| plasmid unnamed4 | ||||
| 26830 | 76 aa hypothetical protein | |||
| 26835 | M | M.Sso524ORF460P (100% identity) | M.Eco1287ORF26835P | |
| 26840 | 269 aa hypothetical protein | |||