Escherichia coli FDAARGOS_1303 |
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Putative Escherichia coli FDAARGOS_1303 RM systems
Ref: Sokurenko,E. et al. unpublished
REBASE ref # 31673
| Sequence length: | GenBank #: | |
| Chromosome: | 5,205,669 bp | CP070045 |
| plasmid unnamed: | 86,762 bp | CP070044 |
REBASE acronym: EcoS1303
Org_num: 46634
All begin I6K33_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 25085 | endoribonuclease SymE | |||
| 25090 | S | S.EcosS1ORF16790P (100% identity) | CCANNNNNNNCTTC | S.EcoS1303ORF25095P |
| 25095 | M | M.Ecoppa1ORF6185P (100% identity) | CCANNNNNNNCTTC | M.EcoS1303ORF25095P |
| 25100 | R | EcosS1ORF16790P (100% identity) | CCANNNNNNNCTTC | EcoS1303ORF25095P |
| 25105 | adenine/cytosine-specific restriction | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 5570 | 71 aa hypothetical protein | |||
| 5575 | M | M.KaeCRE8ORF15605P (100% identity) | M.EcoS1303ORF5575P | |
| 5580 | helix-turn-helix domain-containing protein | |||
| 7320 | TrmB family transcriptional regulator | |||
| 7325 | M | M.SboBSORF1444P (100% identity) | A | M.EcoS1303ORF7325P |
| 7345 | DUF1737 domain-containing protein | |||
| 11050 | drug/metabolite exporter YedA | |||
| 11055 | V | V.SflC32DcmP (74% identity) | V.EcoS1303DcmP | |
| 11060 | M | M.EcoC9098DcmP (99% identity) | CCWGG | M.EcoS1303DcmP |
| 11065 | phosphohydrolase | |||
| 13400 | Com family DNA-binding transcriptional | |||
| 13405 | M | M.Efe65411ORF7205P (100% identity) | M.EcoS1303ORF13405P | |
| 13410 | flagella biosynthesis regulator Flk | |||
| 14710 | PerC family transcriptional regulator | |||
| 14715 | M | M.Esp911AORF3194P (100% identity) | M.EcoS1303ORF14715P | |
| 14720 | DUF1382 family protein | |||
| 15520 | LexA family transcriptional regulator | |||
| 15525 | M | M.EcoY26ORF4515P (100% identity) | GATC | M.EcoS1303ORF15525P |
| 15530 | PerC family transcriptional regulator | |||
| 18865 | DNA-binding transcriptional regulator Fis | |||
| 18870 | M | M.PmeBin470ORFAP (100% identity) | ATGCAT | M.EcoS1303ORF18870P |
| 18875 | DUF2556 family protein | |||
| 19465 | ribulose-phosphate 3-epimerase | |||
| 19470 | M | M.SspPIBDamP (100% identity) | GATC | M.EcoS1303DamP |
| 19475 | cell division protein DamX | |||
| 24545 | 527 aa hypothetical protein | |||
| 24550 | R | EcosS3ORF15775P (100% identity) | EcoS1303ORF24555P | |
| 24555 | M | M.EcosS3ORF15775P (100% identity) | M.EcoS1303ORF24555P | |
| 24560 | conjugal transfer protein TraG N-terminal | |||
| 24845 | 59 aa hypothetical protein | |||
| 24850 | R | Ecoi127aORF4076P (100% identity) | EcoS1303ORF24850P | |
| 24855 | HNH endonuclease | |||
| 25320 | PerC family transcriptional regulator | |||
| 25325 | M | M.Sso90ORF15820P (100% identity) | GATC | M.EcoS1303ORF25325P |
| 25330 | LexA family transcriptional regulator | |||
| 25360 | 67 aa hypothetical protein | |||
| 25365 | M | M.Ecos142ORF20090P (100% identity) | M.EcoS1303ORF25365P | |
| 25370 | phage lysis protein EssD | |||
| plasmid unnamed | ||||
| 470 | 73 aa hypothetical protein | |||
| 475 | M | M.Sfl2142ORF380P (100% identity) | M.EcoS1303ORF475P | |
| 480 | 103 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 15325 | DinI-like family protein | |||
| 15330 | R | EspFAAGmrSDP (100% identity) | EcoS1303GmrSDP | |
| 15335 | recombinase family protein | |||
| 25100 | type I restriction-modification system | |||
| 25105 | R | EcosS1MrrP (100% identity) | EcoS1303MrrP | |
| 25110 | GTPase | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 6515 | recombination protein NinB | |||
| 6520 | M | M.EcosC25ORF16305P (100% identity) | GATC | M.EcoS1303ORF6520P |
| 6525 | NinE family protein | |||