Escherichia coli FDAARGOS_1290 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Escherichia coli FDAARGOS_1290 RM systems
Ref: Sokurenko,E. et al. unpublished
REBASE ref # 31673
| Sequence length: | GenBank #: | |
| Chromosome: | 5,122,397 bp | CP070048 |
| plasmid unnamed1: | 69,521 bp | CP070049 |
REBASE acronym: Eco1290
Org_num: 46623
All begin I6K20_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 21400 | endoribonuclease SymE | |||
| 21405 | S | S.Ecos69ORF1130P (100% identity) | AACNNNNNNGTGC | S.Eco1290ORF21410P |
| 21410 | M | M.Ecos69ORF1130P (100% identity) | AACNNNNNNGTGC | M.Eco1290ORF21410P |
| 21415 | R | Ecoo241ORF21620P (100% identity) | AACNNNNNNGTGC | Eco1290ORF21410P |
| 21420 | adenine/cytosine-specific restriction | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3495 | recombination protein NinB | |||
| 3500 | M | M.SflWW1ORF7070P (100% identity) | GATC | M.Eco1290ORF3500P |
| 3505 | NinE family protein | |||
| 4400 | TrmB family transcriptional regulator | |||
| 4405 | M | M.SsoCS14ORF10750P (100% identity) | A | M.Eco1290ORF4405P |
| 4425 | DUF1737 domain-containing protein | |||
| 8085 | drug/metabolite exporter YedA | |||
| 8090 | V | V.SflC32DcmP (74% identity) | V.Eco1290DcmP | |
| 8095 | M | M.SflC32DcmP (100% identity) | CCWGG | M.Eco1290DcmP |
| 8100 | phosphohydrolase | |||
| 15365 | DNA-binding transcriptional regulator Fis | |||
| 15370 | M | M.Ecos69ORF20890P (100% identity) | ATGCAT | M.Eco1290ORF15370P |
| 15375 | DUF2556 family protein | |||
| 15895 | ribulose-phosphate 3-epimerase | |||
| 15900 | M | M.Ecos69DamP (100% identity) | GATC | M.Eco1290DamP |
| 15905 | cell division protein DamX | |||
| 18875 | DUF3850 domain-containing protein | |||
| 18880 | M | M.EcoFu022ORF20P (100% identity) | M.Eco1290ORF18880P | |
| 18885 | R | EcoO783ORF23770P (100% identity) | Eco1290ORF18880P | |
| 18890 | phage portal protein | |||
| plasmid unnamed1 | ||||
| 24570 | 103 aa hypothetical protein | |||
| 24575 | M | M.EcoS016ORF25285P (98% identity) | M.Eco1290ORF24575P | |
| 24580 | 73 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 21390 | R | SenHNK130McrCP (100% identity) | Eco1290McrCP | |
| 21395 | R | SenHNK130McrBP (100% identity) | Eco1290McrBP | |
| 21400 | endoribonuclease SymE | |||
| 21415 | type I restriction-modification system | |||
| 21420 | R | Ssp28760MrrP (100% identity) | Eco1290MrrP | |
| 21425 | GTPase | |||