Escherichia coli EA13 |
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Putative Escherichia coli EA13 RM systems
Ref: Liu,Y. et al. unpublished
REBASE ref # 31819
| Sequence length: | GenBank #: | |
| Chromosome: | 4,733,060 bp | CP069712 |
| plasmid pTA13-1: | 182,585 bp | CP069713 |
| plasmid pTA13-2: | 93,942 bp | CP069714 |
REBASE acronym: EcoEA13
Org_num: 46546
All begin JSQ77_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 19705 | 184 aa hypothetical protein | |||
| 19710 | R | Ecos53ORF20340P (100% identity) | ACYNNNNNNGTTC | EcoEA13ORF19720P |
| 19715 | S | S.Ecos53ORF20340P (100% identity) | ACYNNNNNNGTTC | S.EcoEA13ORF19720P |
| 19720 | M | M.SenS0935ORF770P (99% identity) | ACYNNNNNNGTTC | M.EcoEA13ORF19720P |
| 19725 | type II toxin-antitoxin system RelB/DinJ family | |||
| plasmid pTA13-2 | ||||
| 23985 | 3-phosphatase | |||
| 23990 | R | EfeC18ORF22895P (100% identity) | EcoEA13ORF24000P | |
| 23995 | S | S.Eco1436ORF465P (100% identity) | S.EcoEA13ORF24000P | |
| 24000 | M | M.EcoC6335ORF27850P (100% identity) | M.EcoEA13ORF24000P | |
| 24005 | type II toxin-antitoxin system Phd/YefM family | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1880 | cell division protein DamX | |||
| 1885 | M | M.SspPIBDamP (100% identity) | GATC | M.EcoEA13DamP |
| 1890 | ribulose-phosphate 3-epimerase | |||
| 2505 | DUF2556 family protein | |||
| 2510 | M | M.SspS13ORF21055P (100% identity) | ATGCAT | M.EcoEA13ORF2510P |
| 2515 | DNA-binding transcriptional regulator Fis | |||
| 5555 | transposase | |||
| 5560 | RM | SflLIN17ORF3140P (100% identity) | EcoEA13ORF5560P | |
| 5565 | DEAD/DEAH box helicase | |||
| 9000 | phosphohydrolase | |||
| 9005 | M | M.EcoP3DcmP (100% identity) | CCWGG | M.EcoEA13DcmP |
| 9010 | V | V.EcoSFE8DcmP (100% identity) | V.EcoEA13DcmP | |
| 9015 | drug/metabolite exporter YedA | |||
| plasmid pTA13-1 | ||||
| 22880 | IS1 family transposase | |||
| 22885 | M | M.SflSTLE4ORF22820P (100% identity) | CCWGG | M.EcoEA13ORF22885P |
| 22890 | R | Ssp3CORF24390P (100% identity) | CCWGG | EcoEA13ORF22885P |
| 22895 | IS6-like element IS26 family transposase | |||
| 23545 | 73 aa hypothetical protein | |||
| 23550 | M | M.UbapRSB107ORFAP (100% identity) | SAY | M.EcoEA13ORF23550P |
| 23555 | 102 aa hypothetical protein | |||
| plasmid pTA13-2 | ||||
| 23870 | recombination-associated protein RdgC | |||
| 23875 | M | M.EcoE94ORF27775P (100% identity) | M.EcoEA13ORF23875P | |
| 23890 | tellurite/colicin resistance protein | |||