Escherichia coli FDAARGOS_1254 |
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Putative Escherichia coli FDAARGOS_1254 RM systems
Ref: Sokurenko,E. et al. unpublished
REBASE ref # 31673
| Sequence length: | GenBank #: | |
| Chromosome: | 4,666,387 bp | CP069453 |
| plasmid unnamed1: | 114,230 bp | CP069454 |
| plasmid unnamed2: | 34,826 bp | CP069455 |
| plasmid unnamed3: | 68,946 bp | CP069456 |
REBASE acronym: Eco1254
Org_num: 46595
All begin I6J84_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 10550 | endoribonuclease SymE | |||
| 10555 | S | S.EcoA13I (99% identity) | S.Eco1254ORF10560P | |
| 10560 | M | M.SspS13ORF3945P (100% identity) | M.Eco1254ORF10560P | |
| 10565 | R | EcoUTI89IIP (100% identity) | Eco1254ORF10560P | |
| 10570 | DUF262 domain-containing protein | |||
| plasmid unnamed2 | ||||
| 23115 | type II toxin-antitoxin system Phd/YefM family | |||
| 23120 | M | M.SenceORFJP (99% identity) | CAAYNNNNNNCTGG | M.Eco1254ORF23120P |
| 23125 | S | S.SenceORFJP (100% identity) | CAAYNNNNNNCTGG | S.Eco1254ORF23120P |
| 23130 | R | KpnKPH1ORF27575P (100% identity) | CAAYNNNNNNCTGG | Eco1254ORF23120P |
| 23135 | IS1 family transposase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 4915 | DNA-binding transcriptional regulator Fis | |||
| 4920 | M | M.PmeBin470ORFAP (100% identity) | ATGCAT | M.Eco1254ORF4920P |
| 4925 | DUF2556 family protein | |||
| 5515 | ribulose-phosphate 3-epimerase | |||
| 5520 | M | M.SspPIBDamP (100% identity) | GATC | M.Eco1254DamP |
| 5525 | cell division protein DamX | |||
| 14900 | TraR/DksA family transcriptional regulator | |||
| 14905 | M | M.KpnRKPORF17480P (100% identity) | GATC | M.Eco1254ORF14905P |
| 14910 | replication endonuclease | |||
| 20730 | drug/metabolite exporter YedA | |||
| 20735 | V | V.EcoTob1DcmP (100% identity) | V.Eco1254DcmP | |
| 20740 | M | M.SflC32DcmP (100% identity) | CCWGG | M.Eco1254DcmP |
| 20745 | phosphohydrolase | |||
| plasmid unnamed1 | ||||
| 22915 | 103 aa hypothetical protein | |||
| 22920 | M | M.Sfl0030ORFCP (100% identity) | SAY | M.Eco1254ORF22920P |
| 22925 | 73 aa hypothetical protein | |||
| plasmid unnamed3 | ||||
| 23550 | 103 aa hypothetical protein | |||
| 23555 | M | M.Sfl7ORF23565P (100% identity) | M.Eco1254ORF23555P | |
| 23560 | 73 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 10300 | 120 aa hypothetical protein | |||
| 10305 | M | M.EcosLF82ORF3195P (100% identity) | M.Eco1254ORF10305P | |
| 10310 | R | EcosLF82ORF3195P (100% identity) | Eco1254ORF10305P | |
| 10315 | HNH endonuclease | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 10540 | 26 aa hypothetical protein | |||
| 10545 | R | EcoA13GmrSDP (99% identity) | Eco1254GmrSDP | |
| 10550 | endoribonuclease SymE | |||