Escherichia coli O157:H- 3072/96 |
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Putative Escherichia coli O157:H- 3072/96 RM systems
Ref: Bufe,T. et al. unpublished
REBASE ref # 31841
| Sequence length: | GenBank #: | |
| Chromosome: | 5,543,815 bp | CP028590 |
| plasmid pSFO157: | 140,730 bp | CP028591 |
REBASE acronym: Eco307296
Org_num: 46670
All begin CSW52_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 10570 | DUF262 domain-containing protein | |||
| 10575 | R | Ecos1613ORF27060P (100% identity) | CACNNNNNNNCTGG | Eco307296ORF10580P |
| 10580 | M | M.EcosPA8ORF17615P (100% identity) | CACNNNNNNNCTGG | M.Eco307296ORF10580P |
| 10585 | S | S.EcosPA8ORF17615P (100% identity) | CACNNNNNNNCTGG | S.Eco307296ORF10580P |
| 10590 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1055 | 61 aa hypothetical protein | |||
| 1070 | M | M.EcoLSU61ORF13330P (100% identity) | M.Eco307296ORF1070P | |
| 1075 | 106 aa hypothetical protein | |||
| 10855 | RM | EcosPA8ORF17390P (100% identity) | GAAABCC | Eco307296ORF10855P |
| 10860 | ATP-dependent helicase | |||
| 10890 | N-acetylneuraminate epimerase | |||
| 10895 | R | EcoS946ORF14580P (100% identity) | Eco307296ORF10895P | |
| 10900 | IS3 family transposase | |||
| 12345 | LexA family transcriptional regulator | |||
| 12350 | M | M.EcosA33ORF3820P (100% identity) | GATC | M.Eco307296ORF12350P |
| 12355 | PerC family transcriptional regulator | |||
| 12420 | Eae protein | |||
| 12425 | M | M.EcoLSU61ORF26180P (100% identity) | M.Eco307296ORF12425P | |
| 12430 | 155 aa hypothetical protein | |||
| 16645 | cell division protein DamX | |||
| 16650 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco307296DamP |
| 16655 | ribulose-phosphate 3-epimerase | |||
| 17195 | DUF2556 domain-containing protein | |||
| 17200 | M | M.EcosPA8ORF11510P (100% identity) | ATGCAT | M.Eco307296ORF17200P |
| 17205 | Fis family transcriptional regulator | |||
| 25115 | phosphohydrolase | |||
| 25120 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.Eco307296DcmP |
| 25125 | V | V.EcosPA8DcmP (100% identity) | V.Eco307296DcmP | |
| 25130 | drug/metabolite exporter YedA | |||
| 26000 | TrmB family transcriptional regulator | |||
| 26005 | M | M.EcoZ1836ORF11435P (100% identity) | M.Eco307296ORF26005P | |
| 26025 | Shiga toxin Stx2 subunit A | |||
| plasmid pSFO157 | ||||
| 29620 | 73 aa hypothetical protein | |||
| 29625 | M | M.EcosPA8ORF27775P (100% identity) | M.Eco307296ORF29625P | |
| 29630 | 101 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 10590 | endoribonuclease SymE | |||
| 10595 | R | EcosPA8GmrSDP (55% identity) | Eco307296GmrDP | |
| 10600 | R | Ecos1613GmrSP (100% identity) | Eco307296GmrSP | |
| 10605 | DUF1127 domain-containing protein | |||