Escherichia coli O157:H7 FLT_2002D |
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Putative Escherichia coli O157:H7 FLT_2002D RM systems
Ref: Bono,J.L. and Weinroth,M.D. unpublished
REBASE ref # 31843
| Sequence length: | GenBank #: | |
| Chromosome: | 5,545,223 bp | CP051819 |
| plasmid pFLT_2002D-1: | 92,444 bp | CP051820 |
REBASE acronym: Eco2002D
Org_num: 46680
All begin HH256_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 18770 | 58 aa hypothetical protein | |||
| 18775 | M | M.Ecos1613ORF5225P (100% identity) | CCAYNNNNNGTTY | M.Eco2002DORF18775P |
| 18780 | S | S.Ecos1613ORF5225P (100% identity) | CCAYNNNNNGTTY | S.Eco2002DORF18775P |
| 18785 | DUF4433 domain-containing protein | |||
| 18790 | macro domain-containing protein | |||
| 18795 | R | EcoRC1ORF26055P (100% identity) | CCAYNNNNNGTTY | Eco2002DORF18775P |
| 18800 | M48 family metallopeptidase | |||
| 24230 | DUF262 domain-containing protein | |||
| 24235 | R | Ecos1613ORF27060P (100% identity) | CACNNNNNNNCTGG | Eco2002DORF24240P |
| 24240 | M | M.EcoPT54II (100% identity) | CACNNNNNNNCTGG | M.Eco2002DORF24240P |
| 24245 | S | S.EcosPA8ORF17615P (100% identity) | CACNNNNNNNCTGG | S.Eco2002DORF24240P |
| 24250 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2265 | cell division protein DamX | |||
| 2270 | M | M.Eco17B62DamP (100% identity) | GATC | M.Eco2002DDamP |
| 2275 | ribulose-phosphate 3-epimerase | |||
| 2790 | DUF2556 family protein | |||
| 2795 | M | M.EcosPA8ORF11510P (100% identity) | ATGCAT | M.Eco2002DORF2795P |
| 2800 | DNA-binding transcriptional regulator Fis | |||
| 9685 | recombination protein NinB | |||
| 9690 | M | M.Eph2851ORFAP (100% identity) | GATC | M.Eco2002DORF9690P |
| 9695 | NinE family protein | |||
| 10515 | phosphohydrolase | |||
| 10520 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.Eco2002DDcmP |
| 10525 | V | V.EcosPA8DcmP (100% identity) | V.Eco2002DDcmP | |
| 10530 | drug/metabolite exporter YedA | |||
| 15215 | DUF1737 domain-containing protein | |||
| 15230 | M | M.EcosPA8ORF27255P (100% identity) | M.Eco2002DORF15230P | |
| 15235 | TrmB family transcriptional regulator | |||
| 22520 | LexA family transcriptional regulator | |||
| 22525 | M | M.EcoZ1836ORF22690P (100% identity) | GATC | M.Eco2002DORF22525P |
| 22530 | PerC family transcriptional regulator | |||
| 24465 | RM | EcosPA8ORF17390P (100% identity) | GAAABCC | Eco2002DORF24465P |
| 24470 | DEAD/DEAH box helicase | |||
| 24505 | N-acetylneuraminate epimerase | |||
| 24510 | R | Ecos1613ORF26795P (100% identity) | Eco2002DORF24510P | |
| 24515 | transposase | |||
| plasmid pFLT_2002D-1 | ||||
| 27690 | 101 aa hypothetical protein | |||
| 27695 | M | M.EcosPA8ORF27775P (100% identity) | M.Eco2002DORF27695P | |
| 27700 | 73 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 24250 | endoribonuclease SymE | |||
| 24255 | R | EcosPA8GmrSDP (55% identity) | Eco2002DGmrDP | |
| 24260 | R | Ecos1613GmrSP (100% identity) | Eco2002DGmrSP | |
| 24265 | DUF1127 domain-containing protein | |||