Escherichia coli O157:H7 FLT_2009D |
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Putative Escherichia coli O157:H7 FLT_2009D RM systems
Ref: Bono,J.L. and Weinroth,M.D. unpublished
REBASE ref # 31843
| Sequence length: | GenBank #: | |
| Chromosome: | 5,484,727 bp | CP051802 |
| plasmid pFLT_2009D-1: | 94,449 bp | CP051803 |
REBASE acronym: Eco2009D
Org_num: 46688
All begin HH248_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 24120 | DUF262 domain-containing protein | |||
| 24125 | R | Ecos1613ORF27060P (100% identity) | CACNNNNNNNCTGG | Eco2009DORF24130P |
| 24130 | M | M.EcoPT54II (100% identity) | CACNNNNNNNCTGG | M.Eco2009DORF24130P |
| 24135 | S | S.EcosPA8ORF17615P (100% identity) | CACNNNNNNNCTGG | S.Eco2009DORF24130P |
| 24140 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2265 | cell division protein DamX | |||
| 2270 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco2009DDamP |
| 2275 | ribulose-phosphate 3-epimerase | |||
| 2785 | DUF2556 family protein | |||
| 2790 | M | M.EcosPA8ORF11510P (100% identity) | ATGCAT | M.Eco2009DORF2790P |
| 2795 | DNA-binding transcriptional regulator Fis | |||
| 7465 | DUF1382 family protein | |||
| 7470 | M | M.EspP079ORF2847P (100% identity) | GATC | M.Eco2009DORF7470P |
| 7475 | 55 aa hypothetical protein | |||
| 7645 | endonuclease | |||
| 7650 | M | M.EcoTWORF3263P (100% identity) | GATC | M.Eco2009DORF7650P |
| 7655 | NinE family protein | |||
| 10385 | recombination protein NinB | |||
| 10390 | M | M.Eph2851ORFAP (100% identity) | GATC | M.Eco2009DORF10390P |
| 10395 | NinE family protein | |||
| 11195 | phosphohydrolase | |||
| 11200 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.Eco2009DDcmP |
| 11205 | V | V.EcosPA8DcmP (100% identity) | V.Eco2009DDcmP | |
| 11210 | drug/metabolite exporter YedA | |||
| 15475 | DUF1737 domain-containing protein | |||
| 15490 | M | M.EcosPA8ORF27255P (100% identity) | M.Eco2009DORF15490P | |
| 15495 | TrmB family transcriptional regulator | |||
| 24355 | RM | EcosPA8ORF17390P (100% identity) | GAAABCC | Eco2009DORF24355P |
| 24360 | DEAD/DEAH box helicase | |||
| 24390 | N-acetylneuraminate epimerase | |||
| 24395 | R | EcosPA8ORF17350P (100% identity) | Eco2009DORF24395P | |
| 24400 | transposase | |||
| plasmid pFLT_2009D-1 | ||||
| 27570 | 101 aa hypothetical protein | |||
| 27575 | M | M.EcosPA8ORF27775P (100% identity) | M.Eco2009DORF27575P | |
| 27580 | 73 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 24140 | endoribonuclease SymE | |||
| 24145 | R | EcosPA8GmrSDP (55% identity) | Eco2009DGmrDP | |
| 24150 | R | Ecos1613GmrSP (100% identity) | Eco2009DGmrSP | |
| 24155 | DUF1127 domain-containing protein | |||