Escherichia coli O157:H7 FLT_2010E |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Escherichia coli O157:H7 FLT_2010E RM systems
Ref: Bono,J.L. and Weinroth,M.D. unpublished
REBASE ref # 31843
| Sequence length: | GenBank #: | |
| Chromosome: | 5,527,582 bp | CP051798 |
| plasmid pFLT_2010E-1: | 94,606 bp | CP051799 |
REBASE acronym: Eco2010E
Org_num: 46690
All begin HH246_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 24420 | DUF262 domain-containing protein | |||
| 24425 | R | Ecos1613ORF27060P (100% identity) | CACNNNNNNNCTGG | Eco2010EORF24430P |
| 24430 | M | M.EcoPT54II (100% identity) | CACNNNNNNNCTGG | M.Eco2010EORF24430P |
| 24435 | S | S.EcosPA8ORF17615P (100% identity) | CACNNNNNNNCTGG | S.Eco2010EORF24430P |
| 24440 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2265 | cell division protein DamX | |||
| 2270 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco2010EDamP |
| 2275 | ribulose-phosphate 3-epimerase | |||
| 2785 | DUF2556 family protein | |||
| 2790 | M | M.EcosPA8ORF11510P (100% identity) | ATGCAT | M.Eco2010EORF2790P |
| 2795 | DNA-binding transcriptional regulator Fis | |||
| 7465 | DUF1382 family protein | |||
| 7470 | M | M.EspP079ORF2847P (100% identity) | GATC | M.Eco2010EORF7470P |
| 7475 | 55 aa hypothetical protein | |||
| 7645 | endonuclease | |||
| 7650 | M | M.EcoTWORF3263P (100% identity) | GATC | M.Eco2010EORF7650P |
| 7655 | NinE family protein | |||
| 10375 | recombination protein NinB | |||
| 10380 | M | M.Eph2851ORFAP (100% identity) | GATC | M.Eco2010EORF10380P |
| 10385 | NinE family protein | |||
| 11180 | phosphohydrolase | |||
| 11185 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.Eco2010EDcmP |
| 11190 | V | V.EcosPA8DcmP (100% identity) | V.Eco2010EDcmP | |
| 11195 | drug/metabolite exporter YedA | |||
| 15385 | DUF1737 domain-containing protein | |||
| 15395 | M | M.EcoTWORF1742P (100% identity) | M.Eco2010EORF15395P | |
| 15400 | TrmB family transcriptional regulator | |||
| 15790 | DUF1737 domain-containing protein | |||
| 15805 | M | M.EcosPA8ORF27255P (100% identity) | M.Eco2010EORF15805P | |
| 15810 | TrmB family transcriptional regulator | |||
| 24655 | RM | EcosPA8ORF17390P (100% identity) | GAAABCC | Eco2010EORF24655P |
| 24660 | DEAD/DEAH box helicase | |||
| 24690 | N-acetylneuraminate epimerase | |||
| 24695 | R | EcosPA8ORF17350P (100% identity) | Eco2010EORF24695P | |
| 24700 | transposase | |||
| plasmid pFLT_2010E-1 | ||||
| 27870 | 101 aa hypothetical protein | |||
| 27875 | M | M.EcosPA8ORF27775P (100% identity) | M.Eco2010EORF27875P | |
| 27880 | 73 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 24440 | endoribonuclease SymE | |||
| 24445 | R | EcosPA8GmrSDP (55% identity) | Eco2010EGmrDP | |
| 24450 | R | Ecos1613GmrSP (100% identity) | Eco2010EGmrSP | |
| 24455 | DUF1127 domain-containing protein | |||