Escherichia coli O157:H7 FLT_2011B |
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Putative Escherichia coli O157:H7 FLT_2011B RM systems
Ref: Bono,J.L. and Weinroth,M.D. unpublished
REBASE ref # 31843
| Sequence length: | GenBank #: | |
| Chromosome: | 5,521,421 bp | CP051792 |
| plasmid pFLT_2011B-1: | 95,633 bp | CP051795 |
REBASE acronym: Eco2011B
Org_num: 46693
All begin HH244_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 24235 | DUF262 domain-containing protein | |||
| 24240 | R | Ecos1613ORF27060P (100% identity) | CACNNNNNNNCTGG | Eco2011BORF24245P |
| 24245 | M | M.EcoPT54II (100% identity) | CACNNNNNNNCTGG | M.Eco2011BORF24245P |
| 24250 | S | S.EcosPA8ORF17615P (100% identity) | CACNNNNNNNCTGG | S.Eco2011BORF24245P |
| 24255 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2265 | cell division protein DamX | |||
| 2270 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco2011BDamP |
| 2275 | ribulose-phosphate 3-epimerase | |||
| 2780 | DUF2556 family protein | |||
| 2785 | M | M.EcosPA8ORF11510P (100% identity) | ATGCAT | M.Eco2011BORF2785P |
| 2790 | DNA-binding transcriptional regulator Fis | |||
| 7610 | recombination protein NinB | |||
| 7615 | M | M.SflN97ORF15810P (100% identity) | GATC | M.Eco2011BORF7615P |
| 7620 | NinE family protein | |||
| 10055 | recombination protein NinB | |||
| 10060 | M | M.Eph2851ORFAP (100% identity) | GATC | M.Eco2011BORF10060P |
| 10065 | NinE family protein | |||
| 10870 | phosphohydrolase | |||
| 10875 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.Eco2011BDcmP |
| 10880 | V | V.EcosPA8DcmP (100% identity) | V.Eco2011BDcmP | |
| 10885 | drug/metabolite exporter YedA | |||
| 14315 | TrmB family transcriptional regulator | |||
| 14320 | M | M.EcosPA8ORF27255P (100% identity) | M.Eco2011BORF14320P | |
| 14335 | DUF1737 domain-containing protein | |||
| 16310 | DUF1737 domain-containing protein | |||
| 16315 | M | M.EcoZ1836ORF13250P (100% identity) | M.Eco2011BORF16315P | |
| 16320 | TrmB family transcriptional regulator | |||
| 22550 | LexA family transcriptional regulator | |||
| 22555 | M | M.EcoZ1836ORF22690P (100% identity) | GATC | M.Eco2011BORF22555P |
| 22560 | PerC family transcriptional regulator | |||
| 24470 | RM | EcosPA8ORF17390P (100% identity) | GAAABCC | Eco2011BORF24470P |
| 24475 | DEAD/DEAH box helicase | |||
| 24510 | N-acetylneuraminate epimerase | |||
| 24515 | R | Ecos1613ORF26795P (100% identity) | Eco2011BORF24515P | |
| 24520 | transposase | |||
| 24575 | Polarity suppression protein | |||
| 24580 | M | M.EcoZ1836ORF24740P (100% identity) | RGGNCCY | M.Eco2011BORF24580P |
| 24585 | R | EcoZ1836ORF24740P (100% identity) | RGGNCCY | Eco2011BORF24580P |
| 24590 | C | C.EcoZ1836ORF24740P (100% identity) | CTAAGNNNNNCTTAG | C.Eco2011BORF24580P |
| 24595 | integrase arm-type DNA-binding domain-containing | |||
| plasmid pFLT_2011B-1 | ||||
| 27970 | 101 aa hypothetical protein | |||
| 27975 | M | M.EcosPA8ORF27775P (100% identity) | M.Eco2011BORF27975P | |
| 27980 | 73 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 24255 | endoribonuclease SymE | |||
| 24260 | R | EcosPA8GmrSDP (55% identity) | Eco2011BGmrDP | |
| 24265 | R | Ecos1613GmrSP (100% identity) | Eco2011BGmrSP | |
| 24270 | DUF1127 domain-containing protein | |||