Escherichia coli O157:H7 ECP19-598 |
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Putative Escherichia coli O157:H7 ECP19-598 RM systems
Ref: Hoffman,M. et al. unpublished
REBASE ref # 31842
| Sequence length: | GenBank #: | |
| Chromosome: | 5,568,284 bp | CP066753 |
| plasmid unnamed1: | 89,397 bp | CP066754 |
| plasmid unnamed2: | 114,710 bp | CP066755 |
REBASE acronym: Eco19598
Org_num: 46673
All begin JG531_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 24170 | DUF262 domain-containing protein | |||
| 24175 | R | Ecos1613ORF27060P (100% identity) | CACNNNNNNNCTGG | Eco19598ORF24180P |
| 24180 | M | M.EcosPA8ORF17615P (100% identity) | CACNNNNNNNCTGG | M.Eco19598ORF24180P |
| 24185 | S | S.EcosPA8ORF17615P (100% identity) | CACNNNNNNNCTGG | S.Eco19598ORF24180P |
| 24190 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2140 | cell division protein DamX | |||
| 2145 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco19598DamP |
| 2150 | ribulose-phosphate 3-epimerase | |||
| 2665 | DUF2556 family protein | |||
| 2670 | M | M.EcosPA8ORF11510P (100% identity) | ATGCAT | M.Eco19598ORF2670P |
| 2675 | DNA-binding transcriptional regulator Fis | |||
| 7320 | DUF1382 family protein | |||
| 7325 | M | M.Sso1099ORF735P (100% identity) | GATC | M.Eco19598ORF7325P |
| 7330 | regulator | |||
| 7415 | Rha family transcriptional regulator | |||
| 7420 | R | Sso1099IP (100% identity) | CTGCAG | Eco19598ORF7425P |
| 7425 | M | M.EcoG5295ORF7835P (100% identity) | CTGCAG | M.Eco19598ORF7425P |
| 7430 | LexA family transcriptional regulator | |||
| 9920 | recombination protein NinB | |||
| 9925 | M | M.Eph2851ORFAP (100% identity) | GATC | M.Eco19598ORF9925P |
| 9930 | NinE family protein | |||
| 10755 | phosphohydrolase | |||
| 10760 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.Eco19598DcmP |
| 10765 | V | V.EcosPA8DcmP (100% identity) | V.Eco19598DcmP | |
| 10770 | drug/metabolite exporter YedA | |||
| 15300 | DUF1737 domain-containing protein | |||
| 15315 | M | M.EcosPA8ORF27255P (100% identity) | M.Eco19598ORF15315P | |
| 15320 | TrmB family transcriptional regulator | |||
| 22455 | LexA family transcriptional regulator | |||
| 22460 | M | M.EcoZ1836ORF22690P (100% identity) | GATC | M.Eco19598ORF22460P |
| 22465 | PerC family transcriptional regulator | |||
| 24405 | RM | EcosPA8ORF17390P (100% identity) | GAAABCC | Eco19598ORF24405P |
| 24410 | DEAD/DEAH box helicase | |||
| 24440 | N-acetylneuraminic acid mutarotase | |||
| 24445 | R | Ecos1613ORF26795P (100% identity) | Eco19598ORF24445P | |
| 24450 | transposase | |||
| plasmid unnamed1 | ||||
| 28015 | 103 aa hypothetical protein | |||
| 28020 | M | M.SspPIBORF23080P (100% identity) | M.Eco19598ORF28020P | |
| 28025 | 73 aa hypothetical protein | |||
| plasmid unnamed2 | ||||
| 28155 | 101 aa hypothetical protein | |||
| 28160 | M | M.EcosPA8ORF27775P (100% identity) | M.Eco19598ORF28160P | |
| 28165 | 73 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 24190 | endoribonuclease SymE | |||
| 24195 | R | EcosPA8GmrSDP (55% identity) | Eco19598GmrDP | |
| 24200 | R | Ecos1613GmrSP (100% identity) | Eco19598GmrSP | |
| 24205 | DUF1127 domain-containing protein | |||