Escherichia coli O157:H7 ECP19-198 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Escherichia coli O157:H7 ECP19-198 RM systems
Ref: Hoffman,M. et al. unpublished
REBASE ref # 31842
| Sequence length: | GenBank #: | |
| Chromosome: | 5,464,804 bp | CP066759 |
| plasmid unnamed1: | 118,266 bp | CP066760 |
REBASE acronym: Eco19198
Org_num: 46671
All begin JG533_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 23665 | DUF262 domain-containing protein | |||
| 23670 | R | Ecos1613ORF27060P (100% identity) | CACNNNNNNNCTGG | Eco19198ORF23675P |
| 23675 | M | M.EcosPA8ORF17615P (100% identity) | CACNNNNNNNCTGG | M.Eco19198ORF23675P |
| 23680 | S | S.EcosPA8ORF17615P (100% identity) | CACNNNNNNNCTGG | S.Eco19198ORF23675P |
| 23685 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2045 | cell division protein DamX | |||
| 2050 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco19198DamP |
| 2055 | ribulose-phosphate 3-epimerase | |||
| 2560 | DUF2556 family protein | |||
| 2565 | M | M.EcosPA8ORF11510P (100% identity) | ATGCAT | M.Eco19198ORF2565P |
| 2570 | DNA-binding transcriptional regulator Fis | |||
| 8460 | recombination protein NinB | |||
| 8465 | M | M.Eph2851ORFAP (100% identity) | GATC | M.Eco19198ORF8465P |
| 8470 | NinE family protein | |||
| 9915 | phosphohydrolase | |||
| 9920 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.Eco19198DcmP |
| 9925 | V | V.EcosPA8DcmP (100% identity) | V.Eco19198DcmP | |
| 9930 | drug/metabolite exporter YedA | |||
| 13330 | DUF1367 family protein | |||
| 13335 | R | Ecos15739ORF2910P (100% identity) | Eco19198ORF13345P | |
| 13340 | 329 aa hypothetical protein | |||
| 13345 | M | M.Ecos15739ORF2910P (100% identity) | M.Eco19198ORF13345P | |
| 13350 | 81 aa hypothetical protein | |||
| 14205 | DUF1737 domain-containing protein | |||
| 14220 | M | M.EcosPA8ORF27255P (100% identity) | M.Eco19198ORF14220P | |
| 14225 | TrmB family transcriptional regulator | |||
| 17090 | NinE family protein | |||
| 17095 | M | M.SflWW1ORF7070P (100% identity) | GATC | M.Eco19198ORF17095P |
| 17100 | recombination protein NinB | |||
| 23900 | RM | EcosPA8ORF17390P (100% identity) | GAAABCC | Eco19198ORF23900P |
| 23905 | DEAD/DEAH box helicase | |||
| 23935 | N-acetylneuraminic acid mutarotase | |||
| 23940 | R | Ecos1613ORF26795P (100% identity) | Eco19198ORF23940P | |
| 23945 | transposase | |||
| plasmid unnamed1 | ||||
| 27040 | 101 aa hypothetical protein | |||
| 27045 | M | M.EcosPA8ORF27775P (100% identity) | M.Eco19198ORF27045P | |
| 27050 | 73 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 23685 | endoribonuclease SymE | |||
| 23690 | R | EcosPA8GmrSDP (55% identity) | Eco19198GmrDP | |
| 23695 | R | Ecos1613GmrSP (100% identity) | Eco19198GmrSP | |
| 23700 | DUF1127 domain-containing protein | |||